RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 DPH3Q96FX2 82 aa14.59□□□□□ -0.07
SNX21-208ENST00000466252 PACRGQ96M98 296 aaPredicted RBP14.59□□□□□ -0.07
SNX21-208ENST00000466252 IGKV2-24A0A0C4DH68 120 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 C6orf226Q5I0X4 101 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 Q5VSD8 79 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 PLAC8Q9NZF1 115 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 TOMM7Q9P0U1 55 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 PKIGQ9Y2B9 76 aa14.58□□□□□ -0.08
SNX21-208ENST00000466252 FAM229AH3BQW9 127 aa14.57□□□□□ -0.08
SNX21-208ENST00000466252 C11orf86A6NJI1 115 aa14.56□□□□□ -0.08
SNX21-208ENST00000466252 TLX1NBP0CAT3 122 aa14.56□□□□□ -0.08
SNX21-208ENST00000466252 ZNF22P17026 224 aaPredicted RBP14.56□□□□□ -0.08
SNX21-208ENST00000466252 PTTG1IPP53801 180 aa14.56□□□□□ -0.08
SNX21-208ENST00000466252 MAJINQ3KP22 176 aa14.56□□□□□ -0.08
SNX21-208ENST00000466252 CHTOPQ9Y3Y2 248 aaKnown RBP14.56□□□□□ -0.08
SNX21-208ENST00000466252 TRBV30A0A0K0K1B3 111 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 LEPROTL1O95214 131 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 PRSS2P07478 247 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 SPINK8P0C7L1 97 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 LINC00528Q8N1L1 170 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 LINC00474Q9P2X8 69 aa14.55□□□□□ -0.08
SNX21-208ENST00000466252 GAGE2BQ13066 116 aa14.54□□□□□ -0.08
SNX21-208ENST00000466252 H3BRM9 83 aa14.53□□□□□ -0.08
SNX21-208ENST00000466252 STPG4Q8N801 248 aa14.53□□□□□ -0.08
SNX21-208ENST00000466252 IGLV5-39A0A0G2JS06 123 aa14.52□□□□□ -0.09
SNX21-208ENST00000466252 CKS1BP61024 79 aa14.52□□□□□ -0.09
SNX21-208ENST00000466252 COX7B2Q8TF08 81 aa14.52□□□□□ -0.09
SNX21-208ENST00000466252 C9orf116Q5BN46 136 aaPredicted RBP14.51□□□□□ -0.09
SNX21-208ENST00000466252 Q6ZRP5 223 aa14.51□□□□□ -0.09
SNX21-208ENST00000466252 VPS13BQ7Z7G8 4022 aa14.51□□□□□ -0.09
SNX21-208ENST00000466252 F8VRH5 84 aa14.5□□□□□ -0.09
SNX21-208ENST00000466252 FABP4P15090 132 aa14.5□□□□□ -0.09
SNX21-208ENST00000466252 KRTAP10-4P60372 401 aaPredicted RBP14.5□□□□□ -0.09
SNX21-208ENST00000466252 COA6Q5JTJ3 125 aaKnown RBP14.5□□□□□ -0.09
SNX21-208ENST00000466252 A0A1W2PNN7 141 aa14.49□□□□□ -0.09
SNX21-208ENST00000466252 ODF1Q14990 250 aa14.49□□□□□ -0.09
SNX21-208ENST00000466252 HSPB8Q9UJY1 196 aa14.49□□□□□ -0.09
SNX21-208ENST00000466252 CXCL5P42830 114 aa14.48□□□□□ -0.09
SNX21-208ENST00000466252 RPL18AQ02543 176 aaKnown RBP14.48□□□□□ -0.09
SNX21-208ENST00000466252 TMEM170BQ5T4T1 132 aa14.48□□□□□ -0.09
SNX21-208ENST00000466252 NDUFC2-KCTD14E9PQ53 114 aa14.46□□□□□ -0.09
SNX21-208ENST00000466252 PLA2G1BP04054 148 aaKnown RBP14.46□□□□□ -0.09
SNX21-208ENST00000466252 SRRM2Q9UQ35 2752 aaKnown RBP14.45□□□□□ -0.1
SNX21-208ENST00000466252 TMEM223A0PJW6 202 aa14.45□□□□□ -0.1
SNX21-208ENST00000466252 GAGE2EQ4V326 116 aa14.43□□□□□ -0.1
SNX21-208ENST00000466252 GAGE2DQ9UEU5 116 aa14.43□□□□□ -0.1
SNX21-208ENST00000466252 ABCA13Q86UQ4 5058 aa14.43□□□□□ -0.1
SNX21-208ENST00000466252 H0Y8G0 127 aa14.42□□□□□ -0.1
SNX21-208ENST00000466252 INAFM2P0DMQ5 153 aa14.41□□□□□ -0.1
SNX21-208ENST00000466252 PCLOQ9Y6V0 5065 aa14.4□□□□□ -0.1
SNX21-208ENST00000466252 C9orf129Q5T035 196 aaKnown RBP14.4□□□□□ -0.1
SNX21-208ENST00000466252 KRTAP7-1Q8IUC3 87 aa14.4□□□□□ -0.1
SNX21-208ENST00000466252 MAP1LC3CQ9BXW4 147 aa14.4□□□□□ -0.1
SNX21-208ENST00000466252 RPL37AP61513 92 aaKnown RBP14.39□□□□□ -0.11
SNX21-208ENST00000466252 FAM168BA1KXE4 195 aa14.38□□□□□ -0.11
SNX21-208ENST00000466252 SYS1-DBNDD2H3BUS1 97 aa14.36□□□□□ -0.11
SNX21-208ENST00000466252 ZNF625Q96I27 306 aaPredicted RBP14.36□□□□□ -0.11
SNX21-208ENST00000466252 PMCHL2Q9BQD1 86 aa14.36□□□□□ -0.11
SNX21-208ENST00000466252 C7orf33Q8WU49 177 aa14.35□□□□□ -0.11
SNX21-208ENST00000466252 DPM2O94777 84 aa14.34□□□□□ -0.11
SNX21-208ENST00000466252 PLNP26678 52 aa14.34□□□□□ -0.11
SNX21-208ENST00000466252 XAGE1AQ9HD64 81 aa14.33□□□□□ -0.12
SNX21-208ENST00000466252 FLG2Q5D862 2391 aaPredicted RBP14.32□□□□□ -0.12
SNX21-208ENST00000466252 IGKCP01834 107 aa14.32□□□□□ -0.12
SNX21-208ENST00000466252 PHF5AQ7RTV0 110 aaKnown RBP14.32□□□□□ -0.12
SNX21-208ENST00000466252 SFTA2Q6UW10 78 aa14.31□□□□□ -0.12
SNX21-208ENST00000466252 C3orf79P0CE67 100 aa14.3□□□□□ -0.12
SNX21-208ENST00000466252 HNRNPA3P51991 378 aaKnown RBP14.3□□□□□ -0.12
SNX21-208ENST00000466252 LINC01545Q5VT33 79 aa14.3□□□□□ -0.12
SNX21-208ENST00000466252 PET117Q6UWS5 81 aa14.3□□□□□ -0.12
SNX21-208ENST00000466252 COX17Q14061 63 aa14.29□□□□□ -0.12
SNX21-208ENST00000466252 ERG28Q9UKR5 140 aa14.29□□□□□ -0.12
SNX21-208ENST00000466252 PFN2P35080 140 aa14.28□□□□□ -0.12
SNX21-208ENST00000466252 SERTAD4-AS1Q5TG53 156 aa14.28□□□□□ -0.12
SNX21-208ENST00000466252 FAM19A5Q7Z5A7 132 aaPredicted RBP14.28□□□□□ -0.12
SNX21-208ENST00000466252 LEPROTO15243 131 aa14.27□□□□□ -0.13
SNX21-208ENST00000466252 KRTAP11-1Q8IUC1 163 aa14.27□□□□□ -0.13
SNX21-208ENST00000466252 PRR3P79522 188 aaKnown RBP14.26□□□□□ -0.13
SNX21-208ENST00000466252 PLA2G2DQ9UNK4 145 aa14.26□□□□□ -0.13
SNX21-208ENST00000466252 TSPEAR-AS2P59090 65 aa14.25□□□□□ -0.13
SNX21-208ENST00000466252 PLEKHB2Q96CS7 222 aa14.24□□□□□ -0.13
SNX21-208ENST00000466252 C22orf24Q9Y442 160 aa14.24□□□□□ -0.13
SNX21-208ENST00000466252 HIST3H2BBQ8N257 126 aa14.23□□□□□ -0.13
SNX21-208ENST00000466252 NDUFA12Q9UI09 145 aa14.23□□□□□ -0.13
SNX21-208ENST00000466252 PSORS1C2Q9UIG4 136 aa14.23□□□□□ -0.13
SNX21-208ENST00000466252 PKHD1L1Q86WI1 4243 aa14.23□□□□□ -0.13
SNX21-208ENST00000466252 M0QXV9 152 aa14.22□□□□□ -0.13
SNX21-208ENST00000466252 HERV-K104P63124 156 aa14.22□□□□□ -0.13
SNX21-208ENST00000466252 SND1-IT1Q9HBX3 110 aa14.22□□□□□ -0.13
SNX21-208ENST00000466252 J3QQQ9 107 aa14.21□□□□□ -0.13
SNX21-208ENST00000466252 KRTDAPP60985 99 aa14.21□□□□□ -0.13
SNX21-208ENST00000466252 HERVK_113P61574 105 aa14.21□□□□□ -0.13
SNX21-208ENST00000466252 MYMXA0A1B0GTQ4 84 aa14.2□□□□□ -0.14
SNX21-208ENST00000466252 E9PLD3 99 aa14.2□□□□□ -0.14
SNX21-208ENST00000466252 SRSF9Q13242 221 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX21-208ENST00000466252 LINC00158P58513 81 aa14.19□□□□□ -0.14
SNX21-208ENST00000466252 TP73-AS1Q9UF72 201 aa14.19□□□□□ -0.14
SNX21-208ENST00000466252 IGLV5-37A0A075B6J1 123 aa14.18□□□□□ -0.14
SNX21-208ENST00000466252 HIST1H2BLQ99880 126 aa14.18□□□□□ -0.14
SNX21-208ENST00000466252 SMIM13P0DJ93 91 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms