RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KIR2DL5BQ8NHK3 375 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
SDF4-205ENST00000465727 PLAC8L1A1L4L8 177 aa13.77□□□□□ -0.21
SDF4-205ENST00000465727 TRGV4A0A0C4DH28 118 aa13.76□□□□□ -0.21
SDF4-205ENST00000465727 NDUFC2O95298 119 aa13.76□□□□□ -0.21
SDF4-205ENST00000465727 Q8N814 137 aa13.76□□□□□ -0.21
SDF4-205ENST00000465727 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
SDF4-205ENST00000465727 UTP20O75691 2785 aaKnown RBP13.75□□□□□ -0.21
SDF4-205ENST00000465727 LINC00959A0A1B0GUT2 108 aa13.75□□□□□ -0.21
SDF4-205ENST00000465727 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
SDF4-205ENST00000465727 Q8IZM0 81 aa13.75□□□□□ -0.21
SDF4-205ENST00000465727 WIPF1O43516 503 aa13.75□□□□□ -0.21
SDF4-205ENST00000465727 GHRHP01286 108 aa13.73□□□□□ -0.21
SDF4-205ENST00000465727 DSCR8Q96T75 97 aa13.73□□□□□ -0.21
SDF4-205ENST00000465727 UBL5Q9BZL1 73 aa13.72□□□□□ -0.21
SDF4-205ENST00000465727 DOPEY1Q5JWR5 2465 aa13.72□□□□□ -0.21
SDF4-205ENST00000465727 GIG44P09565 113 aaPredicted RBP13.71□□□□□ -0.21
SDF4-205ENST00000465727 NANOS2P60321 138 aaKnown RBP13.71□□□□□ -0.21
SDF4-205ENST00000465727 MAPK1IP1LQ8NDC0 245 aa13.71□□□□□ -0.21
SDF4-205ENST00000465727 BCE1O60756 84 aa13.7□□□□□ -0.22
SDF4-205ENST00000465727 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
SDF4-205ENST00000465727 FHL2Q14192 279 aa13.7□□□□□ -0.22
SDF4-205ENST00000465727 MXRA5Q9NR99 2828 aa13.69□□□□□ -0.22
SDF4-205ENST00000465727 OXTP01178 125 aa13.69□□□□□ -0.22
SDF4-205ENST00000465727 HILS1P60008 231 aa13.69□□□□□ -0.22
SDF4-205ENST00000465727 COX17Q14061 63 aa13.69□□□□□ -0.22
SDF4-205ENST00000465727 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
SDF4-205ENST00000465727 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
SDF4-205ENST00000465727 C11orf68Q9H3H3 251 aaKnown RBP13.68□□□□□ -0.22
SDF4-205ENST00000465727 TRAV23DV6A0A075B6W5 121 aa13.67□□□□□ -0.22
SDF4-205ENST00000465727 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
SDF4-205ENST00000465727 A0A1B0GUV1 79 aa13.67□□□□□ -0.22
SDF4-205ENST00000465727 XCL1P47992 114 aa13.65□□□□□ -0.22
SDF4-205ENST00000465727 FAM19A1Q7Z5A9 133 aa13.65□□□□□ -0.22
SDF4-205ENST00000465727 CCL24O00175 119 aa13.65□□□□□ -0.22
SDF4-205ENST00000465727 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
SDF4-205ENST00000465727 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
SDF4-205ENST00000465727 WFDC9Q8NEX5 89 aa13.63□□□□□ -0.23
SDF4-205ENST00000465727 Q5XG85 94 aa13.63□□□□□ -0.23
SDF4-205ENST00000465727 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
SDF4-205ENST00000465727 MYO9AB2RTY4 2548 aa13.63□□□□□ -0.23
SDF4-205ENST00000465727 CR1P17927 2039 aa13.62□□□□□ -0.23
SDF4-205ENST00000465727 LOC110117498A0A087WWA1 95 aa13.62□□□□□ -0.23
SDF4-205ENST00000465727 NOTCH3Q9UM47 2321 aa13.61□□□□□ -0.23
SDF4-205ENST00000465727 NBPF19A0A087WUL8 3843 aa13.6□□□□□ -0.23
SDF4-205ENST00000465727 Q6ZQT0 140 aa13.6□□□□□ -0.23
SDF4-205ENST00000465727 C20orf197Q8N268 126 aa13.6□□□□□ -0.23
SDF4-205ENST00000465727 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
SDF4-205ENST00000465727 ZNF561-AS1K7EIQ3 104 aa13.6□□□□□ -0.23
SDF4-205ENST00000465727 RBM3P98179 157 aaKnown RBP13.6□□□□□ -0.23
SDF4-205ENST00000465727 TRAV7A0A075B6U4 112 aa13.59□□□□□ -0.23
SDF4-205ENST00000465727 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
SDF4-205ENST00000465727 LINC00575Q6W349 94 aa13.59□□□□□ -0.23
SDF4-205ENST00000465727 FAM236DA0A1B0GTK5 79 aa13.59□□□□□ -0.23
SDF4-205ENST00000465727 FAM236CP0DP71 79 aa13.59□□□□□ -0.23
SDF4-205ENST00000465727 RPL35AP18077 110 aaKnown RBP13.59□□□□□ -0.23
SDF4-205ENST00000465727 C6orf99Q4VX62 202 aa13.59□□□□□ -0.23
SDF4-205ENST00000465727 H3BQ85 93 aa13.57□□□□□ -0.24
SDF4-205ENST00000465727 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
SDF4-205ENST00000465727 C4orf26Q17RF5 130 aa13.57□□□□□ -0.24
SDF4-205ENST00000465727 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
SDF4-205ENST00000465727 CSMD2Q7Z408 3487 aa13.56□□□□□ -0.24
SDF4-205ENST00000465727 C6orf223Q8N319 242 aa13.56□□□□□ -0.24
SDF4-205ENST00000465727 MUC7Q8TAX7 377 aa13.56□□□□□ -0.24
SDF4-205ENST00000465727 C19orf73Q9NVV2 129 aa13.56□□□□□ -0.24
SDF4-205ENST00000465727 PDE6GP18545 87 aa13.55□□□□□ -0.24
SDF4-205ENST00000465727 CD164L2Q6UWJ8 174 aa13.55□□□□□ -0.24
SDF4-205ENST00000465727 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
SDF4-205ENST00000465727 WNK1Q9H4A3 2382 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 CENPEQ02224 2701 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
SDF4-205ENST00000465727 GYPEP15421 78 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 LINC00482Q8N8I6 264 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 WFDC10AQ9H1F0 79 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 SERP1Q9Y6X1 66 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 KLKP1Q107X0 134 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
SDF4-205ENST00000465727 MAST4O15021 2626 aa13.53□□□□□ -0.24
SDF4-205ENST00000465727 LINC01547P58512 204 aaPredicted RBP13.53□□□□□ -0.24
SDF4-205ENST00000465727 H7BZZ5 65 aa13.52□□□□□ -0.24
SDF4-205ENST00000465727 HRCT1Q6UXD1 115 aa13.52□□□□□ -0.24
SDF4-205ENST00000465727 NAV2Q8IVL1 2488 aa13.52□□□□□ -0.25
SDF4-205ENST00000465727 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
SDF4-205ENST00000465727 CXCL6P80162 114 aa13.51□□□□□ -0.25
SDF4-205ENST00000465727 CLPSL2Q6UWE3 100 aa13.51□□□□□ -0.25
SDF4-205ENST00000465727 LAMTOR3Q9UHA4 124 aa13.51□□□□□ -0.25
SDF4-205ENST00000465727 C9orf66Q5T8R8 295 aa13.51□□□□□ -0.25
SDF4-205ENST00000465727 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
SDF4-205ENST00000465727 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
SDF4-205ENST00000465727 Q6ZVQ6 151 aa13.49□□□□□ -0.25
SDF4-205ENST00000465727 TLN2Q9Y4G6 2542 aa13.49□□□□□ -0.25
SDF4-205ENST00000465727 ITPR2Q14571 2701 aa13.48□□□□□ -0.25
SDF4-205ENST00000465727 CHCHD10Q8WYQ3 142 aaPredicted RBP13.48□□□□□ -0.25
SDF4-205ENST00000465727 PRO0255Q9UI72 69 aa13.48□□□□□ -0.25
SDF4-205ENST00000465727 DNAJC9-AS1A6NH13 148 aa13.47□□□□□ -0.25
SDF4-205ENST00000465727 LINC00269Q8N2A0 174 aa13.47□□□□□ -0.25
SDF4-205ENST00000465727 HAMPP81172 84 aa13.46□□□□□ -0.25
SDF4-205ENST00000465727 Q8NDZ9 215 aa13.46□□□□□ -0.25
SDF4-205ENST00000465727 MRAPQ8TCY5 172 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms