RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
THBS3-205ENST00000465596 KRTDAPP60985 99 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 S100A12P80511 92 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 PMCHL1Q16048 86 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 SCGB3A1Q96QR1 104 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 VCX2Q9H322 139 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 CST9LQ9H4G1 147 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 MRPL35Q9NZE8 188 aaKnown RBP4.85□□□□□ -1.63
THBS3-205ENST00000465596 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
THBS3-205ENST00000465596 A0A0J9YXV3 536 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 TINCRA0A1B0GVN0 87 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 SMIM1B2RUZ4 78 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 ZNF561-AS1K7EIQ3 104 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 ATP5LO75964 103 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 MALP21145 153 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
THBS3-205ENST00000465596 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 Q6ZN92 141 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 C2orf88Q9BSF0 95 aa4.84□□□□□ -1.63
THBS3-205ENST00000465596 F8WDY8 70 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 APOMO95445 188 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 IGLC3P0DOY3 106 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 PTTG1IPP53801 180 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 HERVK_113P63121 156 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 PMVKQ15126 192 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 C2orf82Q6UX34 121 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
THBS3-205ENST00000465596 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 NUPR1O60356 82 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 JOSD1Q15040 202 aaPredicted RBP4.82□□□□□ -1.64
THBS3-205ENST00000465596 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 Q6ZRP5 223 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 Q8IZM0 81 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 LINC00518Q8N0U6 118 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 C12orf57Q99622 126 aa4.82□□□□□ -1.64
THBS3-205ENST00000465596 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 NDUFA1O15239 70 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 MAJINQ3KP22 176 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 STPG4Q8N801 248 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 IFI27L1Q96BM0 104 aa4.81□□□□□ -1.64
THBS3-205ENST00000465596 TRBV30A0A0K0K1B3 111 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 C11orf86A6NJI1 115 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 H0Y8G0 127 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 SYS1-DBNDD2H3BUS1 97 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 PLA2G1BP04054 148 aaKnown RBP4.8□□□□□ -1.64
THBS3-205ENST00000465596 C3orf79P0CE67 100 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 ZNF22P17026 224 aaPredicted RBP4.8□□□□□ -1.64
THBS3-205ENST00000465596 SEC11AP67812 179 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 C9orf116Q5BN46 136 aaPredicted RBP4.8□□□□□ -1.64
THBS3-205ENST00000465596 LINC00474Q9P2X8 69 aa4.8□□□□□ -1.64
THBS3-205ENST00000465596 TRAV12-1A0A0B4J245 112 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 RPL37AP61513 92 aaKnown RBP4.79□□□□□ -1.64
THBS3-205ENST00000465596 C9orf129Q5T035 196 aaKnown RBP4.79□□□□□ -1.64
THBS3-205ENST00000465596 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 LINC00469Q8N7U9 141 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 VAMP8Q9BV40 100 aa4.79□□□□□ -1.64
THBS3-205ENST00000465596 TSTD3H0UI37 97 aa4.78□□□□□ -1.64
THBS3-205ENST00000465596 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
THBS3-205ENST00000465596 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
THBS3-205ENST00000465596 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
THBS3-205ENST00000465596 PYY3Q5JQD4 70 aa4.78□□□□□ -1.64
THBS3-205ENST00000465596 GEMIN7Q9H840 131 aaKnown RBP4.78□□□□□ -1.64
THBS3-205ENST00000465596 PKIGQ9Y2B9 76 aa4.78□□□□□ -1.64
THBS3-205ENST00000465596 F8VRH5 84 aa4.77□□□□□ -1.65
THBS3-205ENST00000465596 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
THBS3-205ENST00000465596 ODF1Q14990 250 aa4.77□□□□□ -1.65
THBS3-205ENST00000465596 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
THBS3-205ENST00000465596 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
THBS3-205ENST00000465596 DPM2O94777 84 aa4.76□□□□□ -1.65
THBS3-205ENST00000465596 PLNP26678 52 aa4.76□□□□□ -1.65
THBS3-205ENST00000465596 CXCL5P42830 114 aa4.76□□□□□ -1.65
THBS3-205ENST00000465596 ZNF625Q96I27 306 aaPredicted RBP4.76□□□□□ -1.65
THBS3-205ENST00000465596 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
THBS3-205ENST00000465596 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
THBS3-205ENST00000465596 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 IGKCP01834 107 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 HERVK_113P61574 105 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 C6orf226Q5I0X4 101 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 SERTAD4-AS1Q5TG53 156 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 LINC01545Q5VT33 79 aa4.75□□□□□ -1.65
THBS3-205ENST00000465596 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
THBS3-205ENST00000465596 H3BRM9 83 aa4.74□□□□□ -1.65
THBS3-205ENST00000465596 PRSS2P07478 247 aa4.74□□□□□ -1.65
THBS3-205ENST00000465596 CKS1BP61024 79 aa4.74□□□□□ -1.65
THBS3-205ENST00000465596 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
THBS3-205ENST00000465596 GAGE2EQ4V326 116 aa4.74□□□□□ -1.65
THBS3-205ENST00000465596 SPATA45Q537H7 98 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms