RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 Q8IZM0 81 aa12.08□□□□□ -0.48
LMNB1-204ENST00000463908 F8VRH5 84 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
LMNB1-204ENST00000463908 ODF1Q14990 250 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 C6orf226Q5I0X4 101 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 CIRBP-AS1Q8TBR5 109 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
LMNB1-204ENST00000463908 H0Y8G0 127 aa12.06□□□□□ -0.48
LMNB1-204ENST00000463908 H3BRM9 83 aa12.06□□□□□ -0.48
LMNB1-204ENST00000463908 A0A096LNI7 61 aa12.05□□□□□ -0.48
LMNB1-204ENST00000463908 IGLV5-39A0A0G2JS06 123 aa12.05□□□□□ -0.48
LMNB1-204ENST00000463908 PRSS2P07478 247 aa12.05□□□□□ -0.48
LMNB1-204ENST00000463908 SMR3BP02814 79 aaPredicted RBP12.04□□□□□ -0.48
LMNB1-204ENST00000463908 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
LMNB1-204ENST00000463908 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
LMNB1-204ENST00000463908 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
LMNB1-204ENST00000463908 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
LMNB1-204ENST00000463908 CKS1BP61024 79 aa12.03□□□□□ -0.48
LMNB1-204ENST00000463908 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
LMNB1-204ENST00000463908 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
LMNB1-204ENST00000463908 MAP1LC3CQ9BXW4 147 aa12.02□□□□□ -0.49
LMNB1-204ENST00000463908 FAT1Q14517 4588 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 Q8N1X5 172 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
LMNB1-204ENST00000463908 A0A087WYN8 130 aa12□□□□□ -0.49
LMNB1-204ENST00000463908 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
LMNB1-204ENST00000463908 TLX1NBP0CAT3 122 aa12□□□□□ -0.49
LMNB1-204ENST00000463908 PTTG1IPP53801 180 aa12□□□□□ -0.49
LMNB1-204ENST00000463908 MAJINQ3KP22 176 aa12□□□□□ -0.49
LMNB1-204ENST00000463908 Q6ZRP5 223 aa11.98□□□□□ -0.49
LMNB1-204ENST00000463908 PKIGQ9Y2B9 76 aa11.98□□□□□ -0.49
LMNB1-204ENST00000463908 CXCL5P42830 114 aa11.97□□□□□ -0.49
LMNB1-204ENST00000463908 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
LMNB1-204ENST00000463908 DPM2O94777 84 aa11.96□□□□□ -0.49
LMNB1-204ENST00000463908 C3orf79P0CE67 100 aa11.96□□□□□ -0.49
LMNB1-204ENST00000463908 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
LMNB1-204ENST00000463908 STPG4Q8N801 248 aa11.96□□□□□ -0.49
LMNB1-204ENST00000463908 LINC00474Q9P2X8 69 aa11.96□□□□□ -0.49
LMNB1-204ENST00000463908 IGKCP01834 107 aa11.95□□□□□ -0.5
LMNB1-204ENST00000463908 PLNP26678 52 aa11.95□□□□□ -0.5
LMNB1-204ENST00000463908 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
LMNB1-204ENST00000463908 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
LMNB1-204ENST00000463908 EPM2AB3EWF7 344 aa11.94□□□□□ -0.5
LMNB1-204ENST00000463908 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
LMNB1-204ENST00000463908 LINC01545Q5VT33 79 aa11.94□□□□□ -0.5
LMNB1-204ENST00000463908 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
LMNB1-204ENST00000463908 GAGE2EQ4V326 116 aa11.93□□□□□ -0.5
LMNB1-204ENST00000463908 GAGE2DQ9UEU5 116 aa11.93□□□□□ -0.5
LMNB1-204ENST00000463908 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
LMNB1-204ENST00000463908 ZNF625Q96I27 306 aaPredicted RBP11.92□□□□□ -0.5
LMNB1-204ENST00000463908 KRTDAPP60985 99 aa11.91□□□□□ -0.5
LMNB1-204ENST00000463908 S100A6P06703 90 aa11.9□□□□□ -0.5
LMNB1-204ENST00000463908 SNRPEP62304 92 aaKnown RBP11.9□□□□□ -0.5
LMNB1-204ENST00000463908 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
LMNB1-204ENST00000463908 Q5VSD8 79 aa11.9□□□□□ -0.5
LMNB1-204ENST00000463908 HIST1H2BLQ99880 126 aa11.9□□□□□ -0.5
LMNB1-204ENST00000463908 FAM168BA1KXE4 195 aa11.89□□□□□ -0.51
LMNB1-204ENST00000463908 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
LMNB1-204ENST00000463908 FAM229AH3BQW9 127 aa11.88□□□□□ -0.51
LMNB1-204ENST00000463908 TSPEAR-AS2P59090 65 aa11.88□□□□□ -0.51
LMNB1-204ENST00000463908 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
LMNB1-204ENST00000463908 LEPROTO15243 131 aa11.87□□□□□ -0.51
LMNB1-204ENST00000463908 S100A2P29034 98 aa11.86□□□□□ -0.51
LMNB1-204ENST00000463908 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
LMNB1-204ENST00000463908 XAGE1AQ9HD64 81 aa11.86□□□□□ -0.51
LMNB1-204ENST00000463908 DMBT1Q9UGM3 2413 aaPredicted RBP11.86□□□□□ -0.51
LMNB1-204ENST00000463908 PFN2P35080 140 aa11.85□□□□□ -0.51
LMNB1-204ENST00000463908 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
LMNB1-204ENST00000463908 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
LMNB1-204ENST00000463908 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
LMNB1-204ENST00000463908 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
LMNB1-204ENST00000463908 E9PLD3 99 aa11.83□□□□□ -0.52
LMNB1-204ENST00000463908 J3QQQ9 107 aa11.83□□□□□ -0.52
LMNB1-204ENST00000463908 HERVK_113P61574 105 aa11.83□□□□□ -0.52
LMNB1-204ENST00000463908 COX17Q14061 63 aa11.82□□□□□ -0.52
LMNB1-204ENST00000463908 VPS13BQ7Z7G8 4022 aa11.82□□□□□ -0.52
LMNB1-204ENST00000463908 SERTAD4-AS1Q5TG53 156 aa11.81□□□□□ -0.52
LMNB1-204ENST00000463908 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
LMNB1-204ENST00000463908 FAM19A5Q7Z5A7 132 aaPredicted RBP11.81□□□□□ -0.52
LMNB1-204ENST00000463908 MYCBP2O75592 4640 aa11.81□□□□□ -0.52
LMNB1-204ENST00000463908 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
LMNB1-204ENST00000463908 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
LMNB1-204ENST00000463908 C20orf202A1L168 122 aa11.79□□□□□ -0.52
LMNB1-204ENST00000463908 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
LMNB1-204ENST00000463908 HERV-K104P63124 156 aa11.79□□□□□ -0.52
LMNB1-204ENST00000463908 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
LMNB1-204ENST00000463908 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
LMNB1-204ENST00000463908 IGKV2D-26A0A0A0MRZ7 120 aa11.78□□□□□ -0.52
LMNB1-204ENST00000463908 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
LMNB1-204ENST00000463908 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
LMNB1-204ENST00000463908 LINC00158P58513 81 aa11.78□□□□□ -0.52
LMNB1-204ENST00000463908 ATOH7Q8N100 152 aa11.78□□□□□ -0.52
LMNB1-204ENST00000463908 SRRM2Q9UQ35 2752 aaKnown RBP11.77□□□□□ -0.53
LMNB1-204ENST00000463908 LGALS3P17931 250 aaKnown RBP11.77□□□□□ -0.53
LMNB1-204ENST00000463908 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms