RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 TLX1NBP0CAT3 122 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 PMCHL1Q16048 86 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 PLAC8Q9NZF1 115 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 A0A087WYN8 130 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 A0A096LNI7 61 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 IGLC3P0DOY3 106 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 CXCL5P42830 114 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 PTTG1IPP53801 180 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
SEMA3D-203ENST00000463315 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
SEMA3D-203ENST00000463315 H3BRM9 83 aa8.7□□□□□ -1.02
SEMA3D-203ENST00000463315 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
SEMA3D-203ENST00000463315 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SEMA3D-203ENST00000463315 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 S100A1P23297 94 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 NDUFA6P56556 154 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 CKS1BP61024 79 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 IFI27L1Q96BM0 104 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
SEMA3D-203ENST00000463315 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
SEMA3D-203ENST00000463315 SCO1O75880 301 aa8.68□□□□□ -1.02
SEMA3D-203ENST00000463315 SERF1AO75920 110 aa8.68□□□□□ -1.02
SEMA3D-203ENST00000463315 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
SEMA3D-203ENST00000463315 C6orf48Q9UBA6 75 aa8.68□□□□□ -1.02
SEMA3D-203ENST00000463315 F8VRH5 84 aa8.67□□□□□ -1.02
SEMA3D-203ENST00000463315 STPG4Q8N801 248 aa8.67□□□□□ -1.02
SEMA3D-203ENST00000463315 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
SEMA3D-203ENST00000463315 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
SEMA3D-203ENST00000463315 LINC00310P59036 64 aa8.66□□□□□ -1.02
SEMA3D-203ENST00000463315 FAM19A2Q8N3H0 131 aa8.66□□□□□ -1.02
SEMA3D-203ENST00000463315 FAT1Q14517 4588 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 ABCA13Q86UQ4 5058 aa8.65□□□□□ -1.02
SEMA3D-203ENST00000463315 HIST1H2BKO60814 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BJP06899 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BOP23527 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BBP33778 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BDP58876 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BCP62807 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST2H2BEQ16778 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 Q6ZRP5 223 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BHQ93079 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BNQ99877 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 HIST1H2BMQ99879 126 aa8.64□□□□□ -1.03
SEMA3D-203ENST00000463315 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
SEMA3D-203ENST00000463315 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
SEMA3D-203ENST00000463315 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
SEMA3D-203ENST00000463315 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
SEMA3D-203ENST00000463315 ODF1Q14990 250 aa8.63□□□□□ -1.03
SEMA3D-203ENST00000463315 NUPR1O60356 82 aa8.62□□□□□ -1.03
SEMA3D-203ENST00000463315 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
SEMA3D-203ENST00000463315 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
SEMA3D-203ENST00000463315 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
SEMA3D-203ENST00000463315 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
SEMA3D-203ENST00000463315 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
SEMA3D-203ENST00000463315 ATP6V1G1O75348 118 aa8.59□□□□□ -1.03
SEMA3D-203ENST00000463315 PLNP26678 52 aa8.59□□□□□ -1.03
SEMA3D-203ENST00000463315 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 COX17Q14061 63 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 KRTAP9-9Q9BYP9 154 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 KRTAP9-4Q9BYQ2 154 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
SEMA3D-203ENST00000463315 FABP4P15090 132 aa8.57□□□□□ -1.04
SEMA3D-203ENST00000463315 H3BS24 57 aa8.55□□□□□ -1.04
SEMA3D-203ENST00000463315 DPM2O94777 84 aa8.55□□□□□ -1.04
SEMA3D-203ENST00000463315 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
SEMA3D-203ENST00000463315 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
SEMA3D-203ENST00000463315 H0Y8G0 127 aa8.54□□□□□ -1.04
SEMA3D-203ENST00000463315 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
SEMA3D-203ENST00000463315 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
SEMA3D-203ENST00000463315 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
SEMA3D-203ENST00000463315 LINC00587B1AMM8 73 aa8.52□□□□□ -1.05
SEMA3D-203ENST00000463315 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
SEMA3D-203ENST00000463315 IGKCP01834 107 aa8.52□□□□□ -1.05
SEMA3D-203ENST00000463315 HERV-K104P63124 156 aa8.52□□□□□ -1.05
SEMA3D-203ENST00000463315 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
SEMA3D-203ENST00000463315 FAM168BA1KXE4 195 aa8.51□□□□□ -1.05
SEMA3D-203ENST00000463315 HERVK_113P61574 105 aa8.51□□□□□ -1.05
SEMA3D-203ENST00000463315 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
SEMA3D-203ENST00000463315 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
SEMA3D-203ENST00000463315 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
SEMA3D-203ENST00000463315 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms