RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BNQ99877 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 HIST1H2BMQ99879 126 aa10.57□□□□□ -0.72
HLA-DPA1-245ENST00000463066 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
HLA-DPA1-245ENST00000463066 GAGE2BQ13066 116 aa10.56□□□□□ -0.72
HLA-DPA1-245ENST00000463066 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
HLA-DPA1-245ENST00000463066 LOC107984640A0A0U1RRK4 108 aa10.55□□□□□ -0.72
HLA-DPA1-245ENST00000463066 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
HLA-DPA1-245ENST00000463066 S100A1P23297 94 aa10.55□□□□□ -0.72
HLA-DPA1-245ENST00000463066 PRSS2P07478 247 aa10.54□□□□□ -0.72
HLA-DPA1-245ENST00000463066 RNF151Q2KHN1 245 aa10.54□□□□□ -0.72
HLA-DPA1-245ENST00000463066 C9orf116Q5BN46 136 aaPredicted RBP10.54□□□□□ -0.72
HLA-DPA1-245ENST00000463066 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
HLA-DPA1-245ENST00000463066 F8WDY8 70 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 FABP4P15090 132 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 RPL18AQ02543 176 aaKnown RBP10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 Q8IZM0 81 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 STPG4Q8N801 248 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 PLAC8Q9NZF1 115 aa10.53□□□□□ -0.72
HLA-DPA1-245ENST00000463066 H0Y8G0 127 aa10.52□□□□□ -0.73
HLA-DPA1-245ENST00000463066 FAM229AH3BQW9 127 aa10.52□□□□□ -0.73
HLA-DPA1-245ENST00000463066 COX7B2Q8TF08 81 aa10.52□□□□□ -0.73
HLA-DPA1-245ENST00000463066 VPS13BQ7Z7G8 4022 aa10.52□□□□□ -0.73
HLA-DPA1-245ENST00000463066 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
HLA-DPA1-245ENST00000463066 CKS1BP61024 79 aa10.51□□□□□ -0.73
HLA-DPA1-245ENST00000463066 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
HLA-DPA1-245ENST00000463066 H3BRM9 83 aa10.5□□□□□ -0.73
HLA-DPA1-245ENST00000463066 Q6ZRP5 223 aa10.5□□□□□ -0.73
HLA-DPA1-245ENST00000463066 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
HLA-DPA1-245ENST00000463066 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
HLA-DPA1-245ENST00000463066 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
HLA-DPA1-245ENST00000463066 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
HLA-DPA1-245ENST00000463066 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
HLA-DPA1-245ENST00000463066 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
HLA-DPA1-245ENST00000463066 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
HLA-DPA1-245ENST00000463066 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
HLA-DPA1-245ENST00000463066 F8VRH5 84 aa10.47□□□□□ -0.73
HLA-DPA1-245ENST00000463066 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
HLA-DPA1-245ENST00000463066 ODF1Q14990 250 aa10.47□□□□□ -0.73
HLA-DPA1-245ENST00000463066 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
HLA-DPA1-245ENST00000463066 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
HLA-DPA1-245ENST00000463066 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
HLA-DPA1-245ENST00000463066 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.73
HLA-DPA1-245ENST00000463066 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
HLA-DPA1-245ENST00000463066 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 CXCL5P42830 114 aa10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 RPL37AP61513 92 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-245ENST00000463066 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
HLA-DPA1-245ENST00000463066 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
HLA-DPA1-245ENST00000463066 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-245ENST00000463066 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
HLA-DPA1-245ENST00000463066 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
HLA-DPA1-245ENST00000463066 FAM19A5Q7Z5A7 132 aaPredicted RBP10.41□□□□□ -0.74
HLA-DPA1-245ENST00000463066 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-245ENST00000463066 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-245ENST00000463066 MAP1LC3CQ9BXW4 147 aa10.4□□□□□ -0.74
HLA-DPA1-245ENST00000463066 DPM2O94777 84 aa10.38□□□□□ -0.75
HLA-DPA1-245ENST00000463066 C7orf33Q8WU49 177 aa10.38□□□□□ -0.75
HLA-DPA1-245ENST00000463066 SYS1-DBNDD2H3BUS1 97 aa10.37□□□□□ -0.75
HLA-DPA1-245ENST00000463066 PFN2P35080 140 aa10.37□□□□□ -0.75
HLA-DPA1-245ENST00000463066 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
HLA-DPA1-245ENST00000463066 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
HLA-DPA1-245ENST00000463066 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
HLA-DPA1-245ENST00000463066 IGKCP01834 107 aa10.35□□□□□ -0.75
HLA-DPA1-245ENST00000463066 PLNP26678 52 aa10.35□□□□□ -0.75
HLA-DPA1-245ENST00000463066 ERG28Q9UKR5 140 aa10.35□□□□□ -0.75
HLA-DPA1-245ENST00000463066 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
HLA-DPA1-245ENST00000463066 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
HLA-DPA1-245ENST00000463066 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
HLA-DPA1-245ENST00000463066 M0QXV9 152 aa10.33□□□□□ -0.76
HLA-DPA1-245ENST00000463066 A0A0U1RRA0 63 aa10.32□□□□□ -0.76
HLA-DPA1-245ENST00000463066 KRTDAPP60985 99 aa10.32□□□□□ -0.76
HLA-DPA1-245ENST00000463066 LINC01545Q5VT33 79 aa10.32□□□□□ -0.76
HLA-DPA1-245ENST00000463066 LEPROTO15243 131 aa10.31□□□□□ -0.76
HLA-DPA1-245ENST00000463066 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
HLA-DPA1-245ENST00000463066 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
HLA-DPA1-245ENST00000463066 PSORS1C2Q9UIG4 136 aa10.3□□□□□ -0.76
HLA-DPA1-245ENST00000463066 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
HLA-DPA1-245ENST00000463066 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
HLA-DPA1-245ENST00000463066 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
HLA-DPA1-245ENST00000463066 C22orf24Q9Y442 160 aa10.29□□□□□ -0.76
HLA-DPA1-245ENST00000463066 J3QQQ9 107 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 LINC00158P58513 81 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 HERVK_113P61574 105 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 Q8NDZ9 215 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
HLA-DPA1-245ENST00000463066 UBE2BP63146 152 aa10.26□□□□□ -0.77
HLA-DPA1-245ENST00000463066 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
HLA-DPA1-245ENST00000463066 HIST1H2BLQ99880 126 aa10.26□□□□□ -0.77
HLA-DPA1-245ENST00000463066 MYMXA0A1B0GTQ4 84 aa10.25□□□□□ -0.77
HLA-DPA1-245ENST00000463066 GAGE10A6NGK3 116 aa10.25□□□□□ -0.77
HLA-DPA1-245ENST00000463066 COX17Q14061 63 aa10.25□□□□□ -0.77
HLA-DPA1-245ENST00000463066 MEIG1Q5JSS6 88 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms