RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
MRPL28-207ENST00000461550 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 SYS1-DBNDD2H3BUS1 97 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 COX6A2Q02221 97 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 SS18Q15532 418 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
MRPL28-207ENST00000461550 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
MRPL28-207ENST00000461550 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
MRPL28-207ENST00000461550 MRPS36P82909 103 aaKnown RBP11.1□□□□□ -0.63
MRPL28-207ENST00000461550 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
MRPL28-207ENST00000461550 SPACA4Q8TDM5 124 aa11.1□□□□□ -0.63
MRPL28-207ENST00000461550 A0A087WYN8 130 aa11.09□□□□□ -0.63
MRPL28-207ENST00000461550 LEPROTL1O95214 131 aa11.09□□□□□ -0.63
MRPL28-207ENST00000461550 HBDP02042 147 aa11.09□□□□□ -0.63
MRPL28-207ENST00000461550 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
MRPL28-207ENST00000461550 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
MRPL28-207ENST00000461550 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
MRPL28-207ENST00000461550 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
MRPL28-207ENST00000461550 MAP1LC3CQ9BXW4 147 aa11.08□□□□□ -0.64
MRPL28-207ENST00000461550 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
MRPL28-207ENST00000461550 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
MRPL28-207ENST00000461550 IGKV2-24A0A0C4DH68 120 aa11.07□□□□□ -0.64
MRPL28-207ENST00000461550 ATOH7Q8N100 152 aa11.07□□□□□ -0.64
MRPL28-207ENST00000461550 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
MRPL28-207ENST00000461550 KRTAP29-1A8MX34 341 aaPredicted RBP11.06□□□□□ -0.64
MRPL28-207ENST00000461550 MAJINQ3KP22 176 aa11.06□□□□□ -0.64
MRPL28-207ENST00000461550 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
MRPL28-207ENST00000461550 LINC01545Q5VT33 79 aa11.06□□□□□ -0.64
MRPL28-207ENST00000461550 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
MRPL28-207ENST00000461550 VAMP3Q15836 100 aa11.05□□□□□ -0.64
MRPL28-207ENST00000461550 ERASQ7Z444 233 aa11.05□□□□□ -0.64
MRPL28-207ENST00000461550 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
MRPL28-207ENST00000461550 VCX2Q9H322 139 aa11.05□□□□□ -0.64
MRPL28-207ENST00000461550 A0A096LNI7 61 aa11.04□□□□□ -0.64
MRPL28-207ENST00000461550 SEC11AP67812 179 aa11.04□□□□□ -0.64
MRPL28-207ENST00000461550 LINC00173Q6ZV60 143 aa11.04□□□□□ -0.64
MRPL28-207ENST00000461550 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 COX7A2LO14548 114 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 MALP21145 153 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 CARD19Q96LW7 228 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 AMELXQ99217 191 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
MRPL28-207ENST00000461550 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
MRPL28-207ENST00000461550 COX8AP10176 69 aa11.02□□□□□ -0.65
MRPL28-207ENST00000461550 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
MRPL28-207ENST00000461550 SYCNQ0VAF6 134 aa11.01□□□□□ -0.65
MRPL28-207ENST00000461550 IGLV4-69A0A075B6H9 119 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 UBE2D1P51668 147 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 PAPPA-AS1Q5QFB9 102 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
MRPL28-207ENST00000461550 ATP5LO75964 103 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 IFI27L1Q96BM0 104 aa11□□□□□ -0.65
MRPL28-207ENST00000461550 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
MRPL28-207ENST00000461550 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
MRPL28-207ENST00000461550 Q6ZRU5 148 aa10.98□□□□□ -0.65
MRPL28-207ENST00000461550 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
MRPL28-207ENST00000461550 K7ERU9 68 aa10.97□□□□□ -0.65
MRPL28-207ENST00000461550 OXTP01178 125 aa10.97□□□□□ -0.65
MRPL28-207ENST00000461550 OCIAD2Q56VL3 154 aa10.97□□□□□ -0.65
MRPL28-207ENST00000461550 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
MRPL28-207ENST00000461550 PMVKQ15126 192 aa10.96□□□□□ -0.65
MRPL28-207ENST00000461550 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
MRPL28-207ENST00000461550 C7orf33Q8WU49 177 aa10.96□□□□□ -0.65
MRPL28-207ENST00000461550 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.65
MRPL28-207ENST00000461550 A0A0J9YXV3 536 aa10.95□□□□□ -0.66
MRPL28-207ENST00000461550 A6NDN8 102 aa10.95□□□□□ -0.66
MRPL28-207ENST00000461550 H3BRM9 83 aa10.95□□□□□ -0.66
MRPL28-207ENST00000461550 Q6ZVH6 145 aa10.95□□□□□ -0.66
MRPL28-207ENST00000461550 GTF2H5Q6ZYL4 71 aa10.95□□□□□ -0.66
MRPL28-207ENST00000461550 H0Y8G0 127 aa10.94□□□□□ -0.66
MRPL28-207ENST00000461550 SPAG11BQ08648 103 aa10.94□□□□□ -0.66
MRPL28-207ENST00000461550 APOMO95445 188 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 HSD52Q0P140 79 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 BOD1L2Q8IYS8 172 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 GEMIN7Q9H840 131 aaKnown RBP10.93□□□□□ -0.66
MRPL28-207ENST00000461550 PKIGQ9Y2B9 76 aa10.93□□□□□ -0.66
MRPL28-207ENST00000461550 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
MRPL28-207ENST00000461550 C9orf118A6NHY6 69 aa10.92□□□□□ -0.66
MRPL28-207ENST00000461550 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
MRPL28-207ENST00000461550 A0A087WZ39 114 aa10.91□□□□□ -0.66
MRPL28-207ENST00000461550 PRR3P79522 188 aaKnown RBP10.91□□□□□ -0.66
MRPL28-207ENST00000461550 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
MRPL28-207ENST00000461550 HERVK_113P63121 156 aa10.9□□□□□ -0.66
MRPL28-207ENST00000461550 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
MRPL28-207ENST00000461550 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
MRPL28-207ENST00000461550 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
MRPL28-207ENST00000461550 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
MRPL28-207ENST00000461550 VPS25Q9BRG1 176 aa10.89□□□□□ -0.67
MRPL28-207ENST00000461550 ODF1Q14990 250 aa10.88□□□□□ -0.67
MRPL28-207ENST00000461550 RNF151Q2KHN1 245 aa10.88□□□□□ -0.67
MRPL28-207ENST00000461550 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
MRPL28-207ENST00000461550 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
MRPL28-207ENST00000461550 C10orf25Q5T742 122 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms