RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 CHTOPQ9Y3Y2 248 aaKnown RBP10.39□□□□□ -0.75
SHANK1-205ENST00000461154 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
SHANK1-205ENST00000461154 NUPR1O60356 82 aa10.38□□□□□ -0.75
SHANK1-205ENST00000461154 CKS1BP61024 79 aa10.38□□□□□ -0.75
SHANK1-205ENST00000461154 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
SHANK1-205ENST00000461154 IGKV2-24A0A0C4DH68 120 aa10.37□□□□□ -0.75
SHANK1-205ENST00000461154 CHTF8P0CG12 524 aa10.37□□□□□ -0.75
SHANK1-205ENST00000461154 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
SHANK1-205ENST00000461154 SPACA4Q8TDM5 124 aa10.37□□□□□ -0.75
SHANK1-205ENST00000461154 A0A096LNI7 61 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 TRBV30A0A0K0K1B3 111 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 PANO1I0J062 215 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
SHANK1-205ENST00000461154 CXCL5P42830 114 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
SHANK1-205ENST00000461154 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 F8VRH5 84 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 FABP4P15090 132 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 MAJINQ3KP22 176 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 TMEM170BQ5T4T1 132 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 COX7B2Q8TF08 81 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
SHANK1-205ENST00000461154 PTTG1IPP53801 180 aa10.34□□□□□ -0.75
SHANK1-205ENST00000461154 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
SHANK1-205ENST00000461154 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
SHANK1-205ENST00000461154 A0A087WYN8 130 aa10.33□□□□□ -0.76
SHANK1-205ENST00000461154 H0Y8G0 127 aa10.33□□□□□ -0.76
SHANK1-205ENST00000461154 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
SHANK1-205ENST00000461154 COA6Q5JTJ3 125 aaKnown RBP10.33□□□□□ -0.76
SHANK1-205ENST00000461154 LINC00528Q8N1L1 170 aa10.33□□□□□ -0.76
SHANK1-205ENST00000461154 PLA2G1BP04054 148 aaKnown RBP10.32□□□□□ -0.76
SHANK1-205ENST00000461154 INAFM2P0DMQ5 153 aa10.32□□□□□ -0.76
SHANK1-205ENST00000461154 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
SHANK1-205ENST00000461154 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
SHANK1-205ENST00000461154 ODF1Q14990 250 aa10.31□□□□□ -0.76
SHANK1-205ENST00000461154 STPG4Q8N801 248 aa10.31□□□□□ -0.76
SHANK1-205ENST00000461154 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
SHANK1-205ENST00000461154 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
SHANK1-205ENST00000461154 PLNP26678 52 aa10.29□□□□□ -0.76
SHANK1-205ENST00000461154 SFTA2Q6UW10 78 aa10.28□□□□□ -0.76
SHANK1-205ENST00000461154 TMEM223A0PJW6 202 aa10.27□□□□□ -0.77
SHANK1-205ENST00000461154 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.77
SHANK1-205ENST00000461154 Q6ZRP5 223 aa10.27□□□□□ -0.77
SHANK1-205ENST00000461154 DPM2O94777 84 aa10.26□□□□□ -0.77
SHANK1-205ENST00000461154 GAGE2EQ4V326 116 aa10.26□□□□□ -0.77
SHANK1-205ENST00000461154 GAGE2DQ9UEU5 116 aa10.26□□□□□ -0.77
SHANK1-205ENST00000461154 C7orf33Q8WU49 177 aa10.25□□□□□ -0.77
SHANK1-205ENST00000461154 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
SHANK1-205ENST00000461154 IGKCP01834 107 aa10.24□□□□□ -0.77
SHANK1-205ENST00000461154 HERVK_113P61574 105 aa10.23□□□□□ -0.77
SHANK1-205ENST00000461154 FAT1Q14517 4588 aa10.23□□□□□ -0.77
SHANK1-205ENST00000461154 ABCA13Q86UQ4 5058 aa10.22□□□□□ -0.77
SHANK1-205ENST00000461154 RPL37AP61513 92 aaKnown RBP10.22□□□□□ -0.77
SHANK1-205ENST00000461154 PET117Q6UWS5 81 aa10.22□□□□□ -0.77
SHANK1-205ENST00000461154 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
SHANK1-205ENST00000461154 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
SHANK1-205ENST00000461154 S100A6P06703 90 aa10.2□□□□□ -0.78
SHANK1-205ENST00000461154 C3orf79P0CE67 100 aa10.19□□□□□ -0.78
SHANK1-205ENST00000461154 COX17Q14061 63 aa10.19□□□□□ -0.78
SHANK1-205ENST00000461154 LINC01545Q5VT33 79 aa10.19□□□□□ -0.78
SHANK1-205ENST00000461154 PLEKHB2Q96CS7 222 aa10.19□□□□□ -0.78
SHANK1-205ENST00000461154 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
SHANK1-205ENST00000461154 ERG28Q9UKR5 140 aa10.19□□□□□ -0.78
SHANK1-205ENST00000461154 LEPROTO15243 131 aa10.18□□□□□ -0.78
SHANK1-205ENST00000461154 S100A2P29034 98 aa10.18□□□□□ -0.78
SHANK1-205ENST00000461154 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
SHANK1-205ENST00000461154 KRTDAPP60985 99 aa10.18□□□□□ -0.78
SHANK1-205ENST00000461154 C9orf129Q5T035 196 aaKnown RBP10.18□□□□□ -0.78
SHANK1-205ENST00000461154 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
SHANK1-205ENST00000461154 XAGE1AQ9HD64 81 aa10.18□□□□□ -0.78
SHANK1-205ENST00000461154 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
SHANK1-205ENST00000461154 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
SHANK1-205ENST00000461154 C20orf202A1L168 122 aa10.17□□□□□ -0.78
SHANK1-205ENST00000461154 PFN2P35080 140 aa10.17□□□□□ -0.78
SHANK1-205ENST00000461154 HERV-K104P63124 156 aa10.17□□□□□ -0.78
SHANK1-205ENST00000461154 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
SHANK1-205ENST00000461154 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
SHANK1-205ENST00000461154 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
SHANK1-205ENST00000461154 J3QQQ9 107 aa10.15□□□□□ -0.78
SHANK1-205ENST00000461154 HIST3H2BBQ8N257 126 aa10.15□□□□□ -0.78
SHANK1-205ENST00000461154 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
SHANK1-205ENST00000461154 M0QXV9 152 aa10.14□□□□□ -0.79
SHANK1-205ENST00000461154 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
SHANK1-205ENST00000461154 AKR1D1P51857 326 aa10.14□□□□□ -0.79
SHANK1-205ENST00000461154 PHF5AQ7RTV0 110 aaKnown RBP10.14□□□□□ -0.79
SHANK1-205ENST00000461154 FLG2Q5D862 2391 aaPredicted RBP10.13□□□□□ -0.79
SHANK1-205ENST00000461154 E9PLD3 99 aa10.13□□□□□ -0.79
SHANK1-205ENST00000461154 NMUP48645 174 aa10.13□□□□□ -0.79
SHANK1-205ENST00000461154 LINC00158P58513 81 aa10.13□□□□□ -0.79
SHANK1-205ENST00000461154 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
SHANK1-205ENST00000461154 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
SHANK1-205ENST00000461154 HIST1H2BLQ99880 126 aa10.12□□□□□ -0.79
SHANK1-205ENST00000461154 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
SHANK1-205ENST00000461154 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
SHANK1-205ENST00000461154 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
SHANK1-205ENST00000461154 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
SHANK1-205ENST00000461154 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
SHANK1-205ENST00000461154 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms