RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 TOMM7Q9P0U1 55 aa13.03□□□□□ -0.32
RPUSD3-210ENST00000460909 LINC00474Q9P2X8 69 aa13.03□□□□□ -0.32
RPUSD3-210ENST00000460909 HIST1H2BKO60814 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BJP06899 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 PRSS2P07478 247 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 TLX1NBP0CAT3 122 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 KRTAP10-4P60372 401 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 STPG4Q8N801 248 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
RPUSD3-210ENST00000460909 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
RPUSD3-210ENST00000460909 TRBV30A0A0K0K1B3 111 aa13□□□□□ -0.33
RPUSD3-210ENST00000460909 SPINK8P0C7L1 97 aa13□□□□□ -0.33
RPUSD3-210ENST00000460909 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
RPUSD3-210ENST00000460909 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
RPUSD3-210ENST00000460909 S100A1P23297 94 aa12.99□□□□□ -0.33
RPUSD3-210ENST00000460909 H3BRM9 83 aa12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 PLA2G1BP04054 148 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 CKS1BP61024 79 aa12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 RPL18AQ02543 176 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-210ENST00000460909 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
RPUSD3-210ENST00000460909 C9orf116Q5BN46 136 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-210ENST00000460909 Q6ZRP5 223 aa12.97□□□□□ -0.33
RPUSD3-210ENST00000460909 COX7B2Q8TF08 81 aa12.97□□□□□ -0.33
RPUSD3-210ENST00000460909 LEPROTL1O95214 131 aa12.96□□□□□ -0.33
RPUSD3-210ENST00000460909 A0A1W2PNN7 141 aa12.94□□□□□ -0.34
RPUSD3-210ENST00000460909 F8VRH5 84 aa12.94□□□□□ -0.34
RPUSD3-210ENST00000460909 INAFM2P0DMQ5 153 aa12.94□□□□□ -0.34
RPUSD3-210ENST00000460909 CXCL5P42830 114 aa12.94□□□□□ -0.34
RPUSD3-210ENST00000460909 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
RPUSD3-210ENST00000460909 FABP4P15090 132 aa12.92□□□□□ -0.34
RPUSD3-210ENST00000460909 RPL37AP61513 92 aaKnown RBP12.92□□□□□ -0.34
RPUSD3-210ENST00000460909 ODF1Q14990 250 aa12.92□□□□□ -0.34
RPUSD3-210ENST00000460909 TMEM170BQ5T4T1 132 aa12.92□□□□□ -0.34
RPUSD3-210ENST00000460909 HSPB8Q9UJY1 196 aa12.91□□□□□ -0.34
RPUSD3-210ENST00000460909 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
RPUSD3-210ENST00000460909 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
RPUSD3-210ENST00000460909 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
RPUSD3-210ENST00000460909 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-210ENST00000460909 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-210ENST00000460909 C7orf33Q8WU49 177 aa12.88□□□□□ -0.35
RPUSD3-210ENST00000460909 MYCBP2O75592 4640 aa12.88□□□□□ -0.35
RPUSD3-210ENST00000460909 FLG2Q5D862 2391 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-210ENST00000460909 FAM168BA1KXE4 195 aa12.87□□□□□ -0.35
RPUSD3-210ENST00000460909 H0Y8G0 127 aa12.87□□□□□ -0.35
RPUSD3-210ENST00000460909 KRTAP7-1Q8IUC3 87 aa12.87□□□□□ -0.35
RPUSD3-210ENST00000460909 PKHD1L1Q86WI1 4243 aa12.86□□□□□ -0.35
RPUSD3-210ENST00000460909 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
RPUSD3-210ENST00000460909 MAP1LC3CQ9BXW4 147 aa12.83□□□□□ -0.36
RPUSD3-210ENST00000460909 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
RPUSD3-210ENST00000460909 ZNF625Q96I27 306 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-210ENST00000460909 XAGE1AQ9HD64 81 aa12.82□□□□□ -0.36
RPUSD3-210ENST00000460909 DPM2O94777 84 aa12.8□□□□□ -0.36
RPUSD3-210ENST00000460909 PLNP26678 52 aa12.8□□□□□ -0.36
RPUSD3-210ENST00000460909 PRR3P79522 188 aaKnown RBP12.8□□□□□ -0.36
RPUSD3-210ENST00000460909 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
RPUSD3-210ENST00000460909 PMCHL2Q9BQD1 86 aa12.8□□□□□ -0.36
RPUSD3-210ENST00000460909 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
RPUSD3-210ENST00000460909 SFTA2Q6UW10 78 aa12.78□□□□□ -0.36
RPUSD3-210ENST00000460909 IGKCP01834 107 aa12.77□□□□□ -0.37
RPUSD3-210ENST00000460909 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.37
RPUSD3-210ENST00000460909 LRP1Q07954 4544 aaKnown RBP12.76□□□□□ -0.37
RPUSD3-210ENST00000460909 PFN2P35080 140 aa12.76□□□□□ -0.37
RPUSD3-210ENST00000460909 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
RPUSD3-210ENST00000460909 M0QXV9 152 aa12.75□□□□□ -0.37
RPUSD3-210ENST00000460909 COX17Q14061 63 aa12.75□□□□□ -0.37
RPUSD3-210ENST00000460909 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
RPUSD3-210ENST00000460909 PSORS1C2Q9UIG4 136 aa12.74□□□□□ -0.37
RPUSD3-210ENST00000460909 C3orf79P0CE67 100 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 TSPEAR-AS2P59090 65 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 PET117Q6UWS5 81 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 PLA2G2DQ9UNK4 145 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 FAT3Q8TDW7 4589 aa12.73□□□□□ -0.37
RPUSD3-210ENST00000460909 LEPROTO15243 131 aa12.72□□□□□ -0.37
RPUSD3-210ENST00000460909 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
RPUSD3-210ENST00000460909 PLEKHB2Q96CS7 222 aa12.7□□□□□ -0.38
RPUSD3-210ENST00000460909 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
RPUSD3-210ENST00000460909 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
RPUSD3-210ENST00000460909 HERVK_113P61574 105 aa12.69□□□□□ -0.38
RPUSD3-210ENST00000460909 TP73-AS1Q9UF72 201 aa12.69□□□□□ -0.38
RPUSD3-210ENST00000460909 IGLV5-37A0A075B6J1 123 aa12.68□□□□□ -0.38
RPUSD3-210ENST00000460909 KRTAP29-1A8MX34 341 aaPredicted RBP12.68□□□□□ -0.38
RPUSD3-210ENST00000460909 J3QQQ9 107 aa12.68□□□□□ -0.38
RPUSD3-210ENST00000460909 HERV-K104P63124 156 aa12.68□□□□□ -0.38
RPUSD3-210ENST00000460909 SRSF9Q13242 221 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPUSD3-210ENST00000460909 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
RPUSD3-210ENST00000460909 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
RPUSD3-210ENST00000460909 LINC00158P58513 81 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms