RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GVQW2A0A096LPI5 108 aaPredicted RBP10.14□□□□□ -0.79
SDF4-204ENST00000459994 IGLV5-39A0A0G2JS06 123 aa10.14□□□□□ -0.79
SDF4-204ENST00000459994 SCGB1D1O95968 90 aa10.14□□□□□ -0.79
SDF4-204ENST00000459994 JOSD1Q15040 202 aaPredicted RBP10.14□□□□□ -0.79
SDF4-204ENST00000459994 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
SDF4-204ENST00000459994 SPINK8P0C7L1 97 aa10.13□□□□□ -0.79
SDF4-204ENST00000459994 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
SDF4-204ENST00000459994 HERVK_113P61574 105 aa10.12□□□□□ -0.79
SDF4-204ENST00000459994 Q6ZSA8 131 aa10.12□□□□□ -0.79
SDF4-204ENST00000459994 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
SDF4-204ENST00000459994 FLG2Q5D862 2391 aaPredicted RBP10.1□□□□□ -0.79
SDF4-204ENST00000459994 F8WDY8 70 aa10.1□□□□□ -0.79
SDF4-204ENST00000459994 SPAG11BQ08648 103 aa10.1□□□□□ -0.79
SDF4-204ENST00000459994 Q8IZM0 81 aa10.1□□□□□ -0.79
SDF4-204ENST00000459994 MYCBP2O75592 4640 aa10.1□□□□□ -0.79
SDF4-204ENST00000459994 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 PRSS2P07478 247 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 STPG4Q8N801 248 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 COX7B2Q8TF08 81 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
SDF4-204ENST00000459994 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
SDF4-204ENST00000459994 HERC1Q15751 4861 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 E9PLD3 99 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 LEPROTO15243 131 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 PYY3Q5JQD4 70 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 PLEKHB2Q96CS7 222 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 TOMM7Q9P0U1 55 aa10.08□□□□□ -0.8
SDF4-204ENST00000459994 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
SDF4-204ENST00000459994 CXCL5P42830 114 aa10.06□□□□□ -0.8
SDF4-204ENST00000459994 HSBP1L1C9JCN9 74 aa10.05□□□□□ -0.8
SDF4-204ENST00000459994 FAM229AH3BQW9 127 aa10.05□□□□□ -0.8
SDF4-204ENST00000459994 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
SDF4-204ENST00000459994 SCXQ7RTU7 201 aa10.05□□□□□ -0.8
SDF4-204ENST00000459994 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
SDF4-204ENST00000459994 J3QQQ9 107 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 NDUFA1O15239 70 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 SLPIP03973 132 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 CKS1BP61024 79 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 SYCNQ0VAF6 134 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
SDF4-204ENST00000459994 MAJINQ3KP22 176 aa10.03□□□□□ -0.8
SDF4-204ENST00000459994 IGKV2D-26A0A0A0MRZ7 120 aa10.02□□□□□ -0.81
SDF4-204ENST00000459994 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
SDF4-204ENST00000459994 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
SDF4-204ENST00000459994 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
SDF4-204ENST00000459994 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
SDF4-204ENST00000459994 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
SDF4-204ENST00000459994 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
SDF4-204ENST00000459994 ZNF625Q96I27 306 aaPredicted RBP10.02□□□□□ -0.81
SDF4-204ENST00000459994 NMUP48645 174 aa10.01□□□□□ -0.81
SDF4-204ENST00000459994 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
SDF4-204ENST00000459994 Q6ZRU5 148 aa10.01□□□□□ -0.81
SDF4-204ENST00000459994 CARD19Q96LW7 228 aa10.01□□□□□ -0.81
SDF4-204ENST00000459994 NDUFA12Q9UI09 145 aa10.01□□□□□ -0.81
SDF4-204ENST00000459994 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
SDF4-204ENST00000459994 KRTAP10-4P60372 401 aaPredicted RBP10□□□□□ -0.81
SDF4-204ENST00000459994 CIRBP-AS1Q8TBR5 109 aa10□□□□□ -0.81
SDF4-204ENST00000459994 VAMP8Q9BV40 100 aa10□□□□□ -0.81
SDF4-204ENST00000459994 PKHD1L1Q86WI1 4243 aa9.99□□□□□ -0.81
SDF4-204ENST00000459994 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
SDF4-204ENST00000459994 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
SDF4-204ENST00000459994 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
SDF4-204ENST00000459994 C6orf48Q9UBA6 75 aa9.99□□□□□ -0.81
SDF4-204ENST00000459994 HERV-K104P63124 156 aa9.98□□□□□ -0.81
SDF4-204ENST00000459994 DMBT1Q9UGM3 2413 aaPredicted RBP9.98□□□□□ -0.81
SDF4-204ENST00000459994 PANO1I0J062 215 aa9.97□□□□□ -0.81
SDF4-204ENST00000459994 SPATA45Q537H7 98 aa9.96□□□□□ -0.82
SDF4-204ENST00000459994 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.82
SDF4-204ENST00000459994 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
SDF4-204ENST00000459994 S100A12P80511 92 aa9.95□□□□□ -0.82
SDF4-204ENST00000459994 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
SDF4-204ENST00000459994 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
SDF4-204ENST00000459994 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
SDF4-204ENST00000459994 LRP1Q07954 4544 aaKnown RBP9.94□□□□□ -0.82
SDF4-204ENST00000459994 LINC00587B1AMM8 73 aa9.94□□□□□ -0.82
SDF4-204ENST00000459994 PLA2G1BP04054 148 aaKnown RBP9.94□□□□□ -0.82
SDF4-204ENST00000459994 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
SDF4-204ENST00000459994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
SDF4-204ENST00000459994 COX8AP10176 69 aa9.93□□□□□ -0.82
SDF4-204ENST00000459994 COX17Q14061 63 aa9.93□□□□□ -0.82
SDF4-204ENST00000459994 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
SDF4-204ENST00000459994 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
SDF4-204ENST00000459994 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 DLEU1O43261 78 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 BOD1L2Q8IYS8 172 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
SDF4-204ENST00000459994 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
SDF4-204ENST00000459994 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
SDF4-204ENST00000459994 TIMM17BO60830 172 aa9.9□□□□□ -0.82
SDF4-204ENST00000459994 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.82
SDF4-204ENST00000459994 PFN2P35080 140 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms