RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 SPINK8P0C7L1 97 aa16.48■□□□□ 0.23
SEMA3C-205ENST00000458729 FABP4P15090 132 aa16.48■□□□□ 0.23
SEMA3C-205ENST00000458729 ZNF22P17026 224 aaPredicted RBP16.48■□□□□ 0.23
SEMA3C-205ENST00000458729 C10orf25Q5T742 122 aa16.48■□□□□ 0.23
SEMA3C-205ENST00000458729 SPACA4Q8TDM5 124 aa16.48■□□□□ 0.23
SEMA3C-205ENST00000458729 TRBV30A0A0K0K1B3 111 aa16.47■□□□□ 0.23
SEMA3C-205ENST00000458729 C11orf86A6NJI1 115 aa16.47■□□□□ 0.23
SEMA3C-205ENST00000458729 CHTF8P0CG12 524 aa16.47■□□□□ 0.23
SEMA3C-205ENST00000458729 C2orf82Q6UX34 121 aa16.47■□□□□ 0.23
SEMA3C-205ENST00000458729 A0A096LNI7 61 aa16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 IGKV2-24A0A0C4DH68 120 aa16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 F8VRH5 84 aa16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 CXCL5P42830 114 aa16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 COA6Q5JTJ3 125 aaKnown RBP16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 C6orf48Q9UBA6 75 aa16.46■□□□□ 0.23
SEMA3C-205ENST00000458729 SMR3BP02814 79 aaPredicted RBP16.45■□□□□ 0.22
SEMA3C-205ENST00000458729 COX7B2Q8TF08 81 aa16.45■□□□□ 0.22
SEMA3C-205ENST00000458729 MAJINQ3KP22 176 aa16.45■□□□□ 0.22
SEMA3C-205ENST00000458729 TMEM170BQ5T4T1 132 aa16.45■□□□□ 0.22
SEMA3C-205ENST00000458729 H0Y8G0 127 aa16.43■□□□□ 0.22
SEMA3C-205ENST00000458729 TLX1NBP0CAT3 122 aa16.43■□□□□ 0.22
SEMA3C-205ENST00000458729 PTTG1IPP53801 180 aa16.43■□□□□ 0.22
SEMA3C-205ENST00000458729 GAGE2BQ13066 116 aa16.43■□□□□ 0.22
SEMA3C-205ENST00000458729 KRTAP17-1Q9BYP8 105 aa16.43■□□□□ 0.22
SEMA3C-205ENST00000458729 A0A087WYN8 130 aa16.42■□□□□ 0.22
SEMA3C-205ENST00000458729 IGLV5-39A0A0G2JS06 123 aa16.42■□□□□ 0.22
SEMA3C-205ENST00000458729 ODF1Q14990 250 aa16.42■□□□□ 0.22
SEMA3C-205ENST00000458729 MAP1LC3CQ9BXW4 147 aa16.42■□□□□ 0.22
SEMA3C-205ENST00000458729 FAM229AH3BQW9 127 aa16.41■□□□□ 0.22
SEMA3C-205ENST00000458729 RPL18AQ02543 176 aaKnown RBP16.41■□□□□ 0.22
SEMA3C-205ENST00000458729 EPM2AB3EWF7 344 aa16.4■□□□□ 0.22
SEMA3C-205ENST00000458729 PLAC8Q9NZF1 115 aa16.4■□□□□ 0.22
SEMA3C-205ENST00000458729 STPG4Q8N801 248 aa16.38■□□□□ 0.21
SEMA3C-205ENST00000458729 LINC00528Q8N1L1 170 aa16.37■□□□□ 0.21
SEMA3C-205ENST00000458729 TMEM223A0PJW6 202 aa16.36■□□□□ 0.21
SEMA3C-205ENST00000458729 NDUFC2-KCTD14E9PQ53 114 aa16.36■□□□□ 0.21
SEMA3C-205ENST00000458729 PLNP26678 52 aa16.36■□□□□ 0.21
SEMA3C-205ENST00000458729 Q5VSD8 79 aa16.36■□□□□ 0.21
SEMA3C-205ENST00000458729 C9orf116Q5BN46 136 aaPredicted RBP16.35■□□□□ 0.21
SEMA3C-205ENST00000458729 Q6ZRP5 223 aa16.35■□□□□ 0.21
SEMA3C-205ENST00000458729 DPM2O94777 84 aa16.32■□□□□ 0.2
SEMA3C-205ENST00000458729 SYS1-DBNDD2H3BUS1 97 aa16.31■□□□□ 0.2
SEMA3C-205ENST00000458729 GAGE2EQ4V326 116 aa16.31■□□□□ 0.2
SEMA3C-205ENST00000458729 SFTA2Q6UW10 78 aa16.31■□□□□ 0.2
SEMA3C-205ENST00000458729 KRTAP4-5Q9BYR2 181 aa16.31■□□□□ 0.2
SEMA3C-205ENST00000458729 GAGE2DQ9UEU5 116 aa16.31■□□□□ 0.2
SEMA3C-205ENST00000458729 PLA2G1BP04054 148 aaKnown RBP16.3■□□□□ 0.2
SEMA3C-205ENST00000458729 IGKCP01834 107 aa16.29■□□□□ 0.2
SEMA3C-205ENST00000458729 PMCHL2Q9BQD1 86 aa16.29■□□□□ 0.2
SEMA3C-205ENST00000458729 FAT1Q14517 4588 aa16.29■□□□□ 0.2
SEMA3C-205ENST00000458729 PET117Q6UWS5 81 aa16.27■□□□□ 0.2
SEMA3C-205ENST00000458729 A0A1W2PNN7 141 aa16.25■□□□□ 0.19
SEMA3C-205ENST00000458729 C7orf33Q8WU49 177 aa16.25■□□□□ 0.19
SEMA3C-205ENST00000458729 S100A6P06703 90 aa16.23■□□□□ 0.19
SEMA3C-205ENST00000458729 C3orf79P0CE67 100 aa16.23■□□□□ 0.19
SEMA3C-205ENST00000458729 HERVK_113P61574 105 aa16.23■□□□□ 0.19
SEMA3C-205ENST00000458729 LINC01545Q5VT33 79 aa16.23■□□□□ 0.19
SEMA3C-205ENST00000458729 ZNF625Q96I27 306 aaPredicted RBP16.22■□□□□ 0.19
SEMA3C-205ENST00000458729 RPL37AP61513 92 aaKnown RBP16.21■□□□□ 0.19
SEMA3C-205ENST00000458729 KRTDAPP60985 99 aa16.2■□□□□ 0.18
SEMA3C-205ENST00000458729 C9orf129Q5T035 196 aaKnown RBP16.2■□□□□ 0.18
SEMA3C-205ENST00000458729 PLEKHB2Q96CS7 222 aa16.2■□□□□ 0.18
SEMA3C-205ENST00000458729 LEPROTO15243 131 aa16.19■□□□□ 0.18
SEMA3C-205ENST00000458729 COX17Q14061 63 aa16.19■□□□□ 0.18
SEMA3C-205ENST00000458729 ERG28Q9UKR5 140 aa16.19■□□□□ 0.18
SEMA3C-205ENST00000458729 S100A2P29034 98 aa16.19■□□□□ 0.18
SEMA3C-205ENST00000458729 HIST3H2BBQ8N257 126 aa16.19■□□□□ 0.18
SEMA3C-205ENST00000458729 FAM168BA1KXE4 195 aa16.18■□□□□ 0.18
SEMA3C-205ENST00000458729 XAGE1AQ9HD64 81 aa16.18■□□□□ 0.18
SEMA3C-205ENST00000458729 PFN2P35080 140 aa16.17■□□□□ 0.18
SEMA3C-205ENST00000458729 VPS13BQ7Z7G8 4022 aa16.16■□□□□ 0.18
SEMA3C-205ENST00000458729 C20orf202A1L168 122 aa16.16■□□□□ 0.18
SEMA3C-205ENST00000458729 HERV-K104P63124 156 aa16.16■□□□□ 0.18
SEMA3C-205ENST00000458729 FAM19A5Q7Z5A7 132 aaPredicted RBP16.16■□□□□ 0.18
SEMA3C-205ENST00000458729 NDUFA12Q9UI09 145 aa16.16■□□□□ 0.18
SEMA3C-205ENST00000458729 MYMXA0A1B0GTQ4 84 aa16.15■□□□□ 0.18
SEMA3C-205ENST00000458729 KRTAP10-4P60372 401 aaPredicted RBP16.15■□□□□ 0.18
SEMA3C-205ENST00000458729 J3QQQ9 107 aa16.14■□□□□ 0.17
SEMA3C-205ENST00000458729 INAFM2P0DMQ5 153 aa16.14■□□□□ 0.17
SEMA3C-205ENST00000458729 ABCA13Q86UQ4 5058 aa16.13■□□□□ 0.17
SEMA3C-205ENST00000458729 HIST1H2BLQ99880 126 aa16.13■□□□□ 0.17
SEMA3C-205ENST00000458729 LINC00587B1AMM8 73 aa16.12■□□□□ 0.17
SEMA3C-205ENST00000458729 E9PLD3 99 aa16.12■□□□□ 0.17
SEMA3C-205ENST00000458729 PHF5AQ7RTV0 110 aaKnown RBP16.12■□□□□ 0.17
SEMA3C-205ENST00000458729 KRTAP7-1Q8IUC3 87 aa16.12■□□□□ 0.17
SEMA3C-205ENST00000458729 LGALS3P17931 250 aaKnown RBP16.11■□□□□ 0.17
SEMA3C-205ENST00000458729 NMUP48645 174 aa16.11■□□□□ 0.17
SEMA3C-205ENST00000458729 AKR1D1P51857 326 aa16.11■□□□□ 0.17
SEMA3C-205ENST00000458729 TSPEAR-AS2P59090 65 aa16.11■□□□□ 0.17
SEMA3C-205ENST00000458729 SNRPEP62304 92 aaKnown RBP16.11■□□□□ 0.17
SEMA3C-205ENST00000458729 M0QXV9 152 aa16.1■□□□□ 0.17
SEMA3C-205ENST00000458729 LINC00158P58513 81 aa16.1■□□□□ 0.17
SEMA3C-205ENST00000458729 SRRM2Q9UQ35 2752 aaKnown RBP16.09■□□□□ 0.17
SEMA3C-205ENST00000458729 PLA2G2DQ9UNK4 145 aa16.09■□□□□ 0.17
SEMA3C-205ENST00000458729 MEIG1Q5JSS6 88 aa16.08■□□□□ 0.16
SEMA3C-205ENST00000458729 SERTAD4-AS1Q5TG53 156 aa16.08■□□□□ 0.16
SEMA3C-205ENST00000458729 SND1-IT1Q9HBX3 110 aa16.07■□□□□ 0.16
SEMA3C-205ENST00000458729 C5orf52A6NGY3 159 aa16.06■□□□□ 0.16
SEMA3C-205ENST00000458729 PRR3P79522 188 aaKnown RBP16.06■□□□□ 0.16
SEMA3C-205ENST00000458729 C22orf24Q9Y442 160 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms