RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 IGLV5-45A0A087WSX0 123 aa10.21□□□□□ -0.77
CD28-203ENST00000458610 HSBP1O75506 76 aa10.21□□□□□ -0.77
CD28-203ENST00000458610 CXCL5P42830 114 aa10.21□□□□□ -0.77
CD28-203ENST00000458610 PMCHL1Q16048 86 aa10.21□□□□□ -0.77
CD28-203ENST00000458610 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
CD28-203ENST00000458610 DNAH8Q96JB1 4490 aa10.2□□□□□ -0.78
CD28-203ENST00000458610 C6orf48Q9UBA6 75 aa10.2□□□□□ -0.78
CD28-203ENST00000458610 C2orf82Q6UX34 121 aa10.19□□□□□ -0.78
CD28-203ENST00000458610 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
CD28-203ENST00000458610 IGLC3P0DOY3 106 aa10.18□□□□□ -0.78
CD28-203ENST00000458610 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
CD28-203ENST00000458610 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
CD28-203ENST00000458610 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
CD28-203ENST00000458610 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
CD28-203ENST00000458610 F8VRH5 84 aa10.16□□□□□ -0.78
CD28-203ENST00000458610 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
CD28-203ENST00000458610 KRTAP10-4P60372 401 aaPredicted RBP10.15□□□□□ -0.78
CD28-203ENST00000458610 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
CD28-203ENST00000458610 C9orf116Q5BN46 136 aaPredicted RBP10.15□□□□□ -0.78
CD28-203ENST00000458610 Q6ZRP5 223 aa10.15□□□□□ -0.78
CD28-203ENST00000458610 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
CD28-203ENST00000458610 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
CD28-203ENST00000458610 SPINK8P0C7L1 97 aa10.14□□□□□ -0.79
CD28-203ENST00000458610 CHTOPQ9Y3Y2 248 aaKnown RBP10.14□□□□□ -0.79
CD28-203ENST00000458610 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
CD28-203ENST00000458610 FAT1Q14517 4588 aa10.12□□□□□ -0.79
CD28-203ENST00000458610 SERF1AO75920 110 aa10.12□□□□□ -0.79
CD28-203ENST00000458610 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
CD28-203ENST00000458610 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
CD28-203ENST00000458610 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
CD28-203ENST00000458610 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
CD28-203ENST00000458610 C5orf52A6NGY3 159 aa10.1□□□□□ -0.79
CD28-203ENST00000458610 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
CD28-203ENST00000458610 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
CD28-203ENST00000458610 IGLV5-39A0A0G2JS06 123 aa10.09□□□□□ -0.79
CD28-203ENST00000458610 C11orf86A6NJI1 115 aa10.09□□□□□ -0.79
CD28-203ENST00000458610 SFTA2Q6UW10 78 aa10.09□□□□□ -0.79
CD28-203ENST00000458610 J3QL48 77 aa10.08□□□□□ -0.8
CD28-203ENST00000458610 SNRPEP62304 92 aaKnown RBP10.08□□□□□ -0.8
CD28-203ENST00000458610 KRTAP29-1A8MX34 341 aaPredicted RBP10.07□□□□□ -0.8
CD28-203ENST00000458610 OXTP01178 125 aa10.07□□□□□ -0.8
CD28-203ENST00000458610 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
CD28-203ENST00000458610 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
CD28-203ENST00000458610 AKR1D1P51857 326 aa10.06□□□□□ -0.8
CD28-203ENST00000458610 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
CD28-203ENST00000458610 S100A2P29034 98 aa10.05□□□□□ -0.8
CD28-203ENST00000458610 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
CD28-203ENST00000458610 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
CD28-203ENST00000458610 FLG2Q5D862 2391 aaPredicted RBP10.05□□□□□ -0.8
CD28-203ENST00000458610 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
CD28-203ENST00000458610 FABP4P15090 132 aa10.04□□□□□ -0.8
CD28-203ENST00000458610 LINC00310P59036 64 aa10.04□□□□□ -0.8
CD28-203ENST00000458610 ODF1Q14990 250 aa10.04□□□□□ -0.8
CD28-203ENST00000458610 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 H0Y8G0 127 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 M0QXV9 152 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 NUPR1O60356 82 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 COX17Q14061 63 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 LBHQ53QV2 105 aaPredicted RBP10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 VPS13BQ7Z7G8 4022 aa10.03□□□□□ -0.8
CD28-203ENST00000458610 PLNP26678 52 aa10.02□□□□□ -0.81
CD28-203ENST00000458610 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
CD28-203ENST00000458610 UBE2BP63146 152 aa10.02□□□□□ -0.81
CD28-203ENST00000458610 SPINK6Q6UWN8 80 aa10.02□□□□□ -0.81
CD28-203ENST00000458610 LINC00518Q8N0U6 118 aa10.02□□□□□ -0.81
CD28-203ENST00000458610 MAP1LC3CQ9BXW4 147 aa10.02□□□□□ -0.81
CD28-203ENST00000458610 PSORS1C2Q9UIG4 136 aa10.01□□□□□ -0.81
CD28-203ENST00000458610 SMIM6P0DI80 62 aa10□□□□□ -0.81
CD28-203ENST00000458610 COA6Q5JTJ3 125 aaKnown RBP10□□□□□ -0.81
CD28-203ENST00000458610 ERG28Q9UKR5 140 aa10□□□□□ -0.81
CD28-203ENST00000458610 PFN2P35080 140 aa9.99□□□□□ -0.81
CD28-203ENST00000458610 C1orf137Q5JT78 98 aa9.99□□□□□ -0.81
CD28-203ENST00000458610 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
CD28-203ENST00000458610 PLA2G2DQ9UNK4 145 aa9.99□□□□□ -0.81
CD28-203ENST00000458610 LINC00587B1AMM8 73 aa9.98□□□□□ -0.81
CD28-203ENST00000458610 DPM2O94777 84 aa9.98□□□□□ -0.81
CD28-203ENST00000458610 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
CD28-203ENST00000458610 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
CD28-203ENST00000458610 HERVK_113P61574 105 aa9.97□□□□□ -0.81
CD28-203ENST00000458610 HERV-K104P63124 156 aa9.97□□□□□ -0.81
CD28-203ENST00000458610 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
CD28-203ENST00000458610 SERTAD4-AS1Q5TG53 156 aa9.97□□□□□ -0.81
CD28-203ENST00000458610 REG3GQ6UW15 175 aa9.97□□□□□ -0.81
CD28-203ENST00000458610 ZNF625Q96I27 306 aaPredicted RBP9.97□□□□□ -0.81
CD28-203ENST00000458610 S100A12P80511 92 aa9.96□□□□□ -0.82
CD28-203ENST00000458610 IGKCP01834 107 aa9.95□□□□□ -0.82
CD28-203ENST00000458610 LINC00158P58513 81 aa9.95□□□□□ -0.82
CD28-203ENST00000458610 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms