RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 C3orf79P0CE67 100 aa13.22□□□□□ -0.29
FAM3A-217ENST00000457212 UNQ6190/PRO20217Q6UXQ8 127 aa13.22□□□□□ -0.29
FAM3A-217ENST00000457212 Q6ZSA8 131 aa13.22□□□□□ -0.29
FAM3A-217ENST00000457212 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
FAM3A-217ENST00000457212 CDK2AP2O75956 126 aa13.21□□□□□ -0.29
FAM3A-217ENST00000457212 IGKCP01834 107 aa13.21□□□□□ -0.29
FAM3A-217ENST00000457212 LINC01545Q5VT33 79 aa13.21□□□□□ -0.29
FAM3A-217ENST00000457212 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
FAM3A-217ENST00000457212 KRTDAPP60985 99 aa13.2□□□□□ -0.3
FAM3A-217ENST00000457212 SNRPEP62304 92 aaKnown RBP13.2□□□□□ -0.3
FAM3A-217ENST00000457212 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
FAM3A-217ENST00000457212 HIST1H2BLQ99880 126 aa13.2□□□□□ -0.3
FAM3A-217ENST00000457212 PMCHL2Q9BQD1 86 aa13.2□□□□□ -0.3
FAM3A-217ENST00000457212 C5orf52A6NGY3 159 aa13.19□□□□□ -0.3
FAM3A-217ENST00000457212 C6orf48Q9UBA6 75 aa13.19□□□□□ -0.3
FAM3A-217ENST00000457212 LOC107984640A0A0U1RRK4 108 aa13.18□□□□□ -0.3
FAM3A-217ENST00000457212 FAM30AQ9NZY2 134 aa13.18□□□□□ -0.3
FAM3A-217ENST00000457212 C20orf202A1L168 122 aa13.17□□□□□ -0.3
FAM3A-217ENST00000457212 HERVK_113P61574 105 aa13.16□□□□□ -0.3
FAM3A-217ENST00000457212 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
FAM3A-217ENST00000457212 TLX1NBP0CAT3 122 aa13.15□□□□□ -0.3
FAM3A-217ENST00000457212 AKR1D1P51857 326 aa13.15□□□□□ -0.3
FAM3A-217ENST00000457212 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
FAM3A-217ENST00000457212 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
FAM3A-217ENST00000457212 XGP55808 180 aa13.14□□□□□ -0.31
FAM3A-217ENST00000457212 A0A096LNI7 61 aa13.13□□□□□ -0.31
FAM3A-217ENST00000457212 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
FAM3A-217ENST00000457212 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
FAM3A-217ENST00000457212 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
FAM3A-217ENST00000457212 IGKV2-24A0A0C4DH68 120 aa13.11□□□□□ -0.31
FAM3A-217ENST00000457212 NDUFC2-KCTD14E9PQ53 114 aa13.11□□□□□ -0.31
FAM3A-217ENST00000457212 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
FAM3A-217ENST00000457212 RPL18AQ02543 176 aaKnown RBP13.11□□□□□ -0.31
FAM3A-217ENST00000457212 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
FAM3A-217ENST00000457212 DNAH8Q96JB1 4490 aa13.1□□□□□ -0.31
FAM3A-217ENST00000457212 PANO1I0J062 215 aa13.1□□□□□ -0.31
FAM3A-217ENST00000457212 LEPROTO15243 131 aa13.1□□□□□ -0.31
FAM3A-217ENST00000457212 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
FAM3A-217ENST00000457212 C9orf116Q5BN46 136 aaPredicted RBP13.1□□□□□ -0.31
FAM3A-217ENST00000457212 SCXQ7RTU7 201 aa13.09□□□□□ -0.31
FAM3A-217ENST00000457212 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
FAM3A-217ENST00000457212 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
FAM3A-217ENST00000457212 APOBP04114 4563 aaKnown RBP13.09□□□□□ -0.31
FAM3A-217ENST00000457212 MAJINQ3KP22 176 aa13.08□□□□□ -0.32
FAM3A-217ENST00000457212 Q6ZRP5 223 aa13.08□□□□□ -0.32
FAM3A-217ENST00000457212 CIRBP-AS1Q8TBR5 109 aa13.08□□□□□ -0.32
FAM3A-217ENST00000457212 E9PLD3 99 aa13.07□□□□□ -0.32
FAM3A-217ENST00000457212 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 A0A087WYN8 130 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 J3QQQ9 107 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 HERV-K104P63124 156 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 HAMPP81172 84 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 NDUFA12Q9UI09 145 aa13.05□□□□□ -0.32
FAM3A-217ENST00000457212 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
FAM3A-217ENST00000457212 MYMXA0A1B0GTQ4 84 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 LGALS3P17931 250 aaKnown RBP13.04□□□□□ -0.32
FAM3A-217ENST00000457212 NMUP48645 174 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 COX17Q14061 63 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 GAGE2EQ4V326 116 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 STPG4Q8N801 248 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 GAGE2DQ9UEU5 116 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
FAM3A-217ENST00000457212 TSPEAR-AS2P59090 65 aa13.03□□□□□ -0.32
FAM3A-217ENST00000457212 RYR1P21817 5038 aa13.02□□□□□ -0.32
FAM3A-217ENST00000457212 LINC00587B1AMM8 73 aa13□□□□□ -0.33
FAM3A-217ENST00000457212 PFN2P35080 140 aa13□□□□□ -0.33
FAM3A-217ENST00000457212 ATOH7Q8N100 152 aa13□□□□□ -0.33
FAM3A-217ENST00000457212 EPM2AB3EWF7 344 aa12.99□□□□□ -0.33
FAM3A-217ENST00000457212 SCGB1D1O95968 90 aa12.98□□□□□ -0.33
FAM3A-217ENST00000457212 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
FAM3A-217ENST00000457212 HSPG2P98160 4391 aa12.98□□□□□ -0.33
FAM3A-217ENST00000457212 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
FAM3A-217ENST00000457212 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
FAM3A-217ENST00000457212 A0A1W2PNN7 141 aa12.96□□□□□ -0.33
FAM3A-217ENST00000457212 LINC00158P58513 81 aa12.96□□□□□ -0.33
FAM3A-217ENST00000457212 IGKV2D-26A0A0A0MRZ7 120 aa12.95□□□□□ -0.34
FAM3A-217ENST00000457212 SMR3BP02814 79 aaPredicted RBP12.95□□□□□ -0.34
FAM3A-217ENST00000457212 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
FAM3A-217ENST00000457212 Q8N1X5 172 aa12.95□□□□□ -0.34
FAM3A-217ENST00000457212 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
FAM3A-217ENST00000457212 SMIM13P0DJ93 91 aa12.93□□□□□ -0.34
FAM3A-217ENST00000457212 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
FAM3A-217ENST00000457212 SND1-IT1Q9HBX3 110 aa12.93□□□□□ -0.34
FAM3A-217ENST00000457212 FAM168BA1KXE4 195 aa12.92□□□□□ -0.34
FAM3A-217ENST00000457212 FAM229AH3BQW9 127 aa12.92□□□□□ -0.34
FAM3A-217ENST00000457212 PLA2G2DQ9UNK4 145 aa12.92□□□□□ -0.34
FAM3A-217ENST00000457212 HERC2O95714 4834 aa12.91□□□□□ -0.34
FAM3A-217ENST00000457212 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
FAM3A-217ENST00000457212 ZNF815PA8K554 130 aa12.91□□□□□ -0.34
FAM3A-217ENST00000457212 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
FAM3A-217ENST00000457212 C7orf33Q8WU49 177 aa12.91□□□□□ -0.34
FAM3A-217ENST00000457212 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
FAM3A-217ENST00000457212 JOSD1Q15040 202 aaPredicted RBP12.9□□□□□ -0.34
FAM3A-217ENST00000457212 KRTAP7-1Q8IUC3 87 aa12.88□□□□□ -0.35
FAM3A-217ENST00000457212 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
FAM3A-217ENST00000457212 M0QXV9 152 aa12.87□□□□□ -0.35
FAM3A-217ENST00000457212 SERTAD4-AS1Q5TG53 156 aa12.87□□□□□ -0.35
FAM3A-217ENST00000457212 Q5VSD8 79 aa12.87□□□□□ -0.35
FAM3A-217ENST00000457212 TIMM17BO60830 172 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms