RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 CKS1BP61024 79 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 C2orf82Q6UX34 121 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 Q8IZM0 81 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
COMMD1-205ENST00000455659 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 ZNF22P17026 224 aaPredicted RBP4.48□□□□□ -1.69
COMMD1-205ENST00000455659 CXCL5P42830 114 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 LINC00310P59036 64 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
COMMD1-205ENST00000455659 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 RNF151Q2KHN1 245 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 STPG4Q8N801 248 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 IFI27L1Q96BM0 104 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 DPH3Q96FX2 82 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
COMMD1-205ENST00000455659 C11orf86A6NJI1 115 aa4.47□□□□□ -1.69
COMMD1-205ENST00000455659 H0Y8G0 127 aa4.47□□□□□ -1.69
COMMD1-205ENST00000455659 ATP6V1G1O75348 118 aa4.47□□□□□ -1.69
COMMD1-205ENST00000455659 COX7B2Q8TF08 81 aa4.47□□□□□ -1.69
COMMD1-205ENST00000455659 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
COMMD1-205ENST00000455659 TRAV12-1A0A0B4J245 112 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 A6NJY4 79 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 F8VRH5 84 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 LEPROTL1O95214 131 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 INAFM2P0DMQ5 153 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 GAGE2EQ4V326 116 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 C6orf226Q5I0X4 101 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 TMEM170BQ5T4T1 132 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 Q6ZRP5 223 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 HSPB8Q9UJY1 196 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.7
COMMD1-205ENST00000455659 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
COMMD1-205ENST00000455659 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BKO60814 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BJP06899 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
COMMD1-205ENST00000455659 FAM19A5Q7Z5A7 132 aaPredicted RBP4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
COMMD1-205ENST00000455659 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
COMMD1-205ENST00000455659 IGLV5-39A0A0G2JS06 123 aa4.44□□□□□ -1.7
COMMD1-205ENST00000455659 FABP4P15090 132 aa4.44□□□□□ -1.7
COMMD1-205ENST00000455659 S100A1P23297 94 aa4.44□□□□□ -1.7
COMMD1-205ENST00000455659 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
COMMD1-205ENST00000455659 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
COMMD1-205ENST00000455659 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 M0QXV9 152 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 NUPR1O60356 82 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 PLNP26678 52 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 ODF1Q14990 250 aa4.43□□□□□ -1.7
COMMD1-205ENST00000455659 HERC1Q15751 4861 aa4.42□□□□□ -1.7
COMMD1-205ENST00000455659 TMEM223A0PJW6 202 aa4.42□□□□□ -1.7
COMMD1-205ENST00000455659 C9orf129Q5T035 196 aaKnown RBP4.42□□□□□ -1.7
COMMD1-205ENST00000455659 SFTA2Q6UW10 78 aa4.42□□□□□ -1.7
COMMD1-205ENST00000455659 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
COMMD1-205ENST00000455659 MAP1LC3CQ9BXW4 147 aa4.42□□□□□ -1.7
COMMD1-205ENST00000455659 XAGE1AQ9HD64 81 aa4.42□□□□□ -1.7
COMMD1-205ENST00000455659 DPM2O94777 84 aa4.41□□□□□ -1.7
COMMD1-205ENST00000455659 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
COMMD1-205ENST00000455659 HERVK_113P61574 105 aa4.41□□□□□ -1.7
COMMD1-205ENST00000455659 ERG28Q9UKR5 140 aa4.41□□□□□ -1.7
COMMD1-205ENST00000455659 IGKCP01834 107 aa4.4□□□□□ -1.71
COMMD1-205ENST00000455659 PFN2P35080 140 aa4.4□□□□□ -1.71
COMMD1-205ENST00000455659 UBE2BP63146 152 aa4.4□□□□□ -1.71
COMMD1-205ENST00000455659 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
COMMD1-205ENST00000455659 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
COMMD1-205ENST00000455659 PMCHL2Q9BQD1 86 aa4.4□□□□□ -1.71
COMMD1-205ENST00000455659 SYS1-DBNDD2H3BUS1 97 aa4.39□□□□□ -1.71
COMMD1-205ENST00000455659 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
COMMD1-205ENST00000455659 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 C1orf137Q5JT78 98 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 KRTAP7-1Q8IUC3 87 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 NKAPP1Q8N9T2 125 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 PLEKHB2Q96CS7 222 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 NDUFA12Q9UI09 145 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
COMMD1-205ENST00000455659 C20orf202A1L168 122 aa4.37□□□□□ -1.71
COMMD1-205ENST00000455659 J3QL48 77 aa4.37□□□□□ -1.71
COMMD1-205ENST00000455659 LEPROTO15243 131 aa4.37□□□□□ -1.71
COMMD1-205ENST00000455659 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
COMMD1-205ENST00000455659 KRTDAPP60985 99 aa4.37□□□□□ -1.71
COMMD1-205ENST00000455659 COX17Q14061 63 aa4.37□□□□□ -1.71
COMMD1-205ENST00000455659 MRPL55Q7Z7F7 128 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms