RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 COX17Q14061 63 aa8.64□□□□□ -1.03
ECHDC1-209ENST00000454591 MUC7Q8TAX7 377 aa8.64□□□□□ -1.03
ECHDC1-209ENST00000454591 SMIM11BQ8TCY0 68 aa8.64□□□□□ -1.03
ECHDC1-209ENST00000454591 MAST4O15021 2626 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 NDUFC2O95298 119 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 C6orf226Q5I0X4 101 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 SMR3AQ99954 134 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 CCDC168Q8NDH2 2452 aa8.63□□□□□ -1.03
ECHDC1-209ENST00000454591 MIFP14174 115 aa8.62□□□□□ -1.03
ECHDC1-209ENST00000454591 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
ECHDC1-209ENST00000454591 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
ECHDC1-209ENST00000454591 A0A1B0GX51 115 aa8.61□□□□□ -1.03
ECHDC1-209ENST00000454591 OBSCN-AS1Q96MR7 158 aa8.61□□□□□ -1.03
ECHDC1-209ENST00000454591 MALP21145 153 aa8.6□□□□□ -1.03
ECHDC1-209ENST00000454591 Q8NAQ8 132 aa8.6□□□□□ -1.03
ECHDC1-209ENST00000454591 JMJD1CQ15652 2540 aa8.6□□□□□ -1.03
ECHDC1-209ENST00000454591 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 XCL1P47992 114 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 NDUFV3P56181 108 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 ACANP16112 2415 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 ATP5G1P05496 136 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 DAD1P61803 113 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
ECHDC1-209ENST00000454591 PFN2P35080 140 aa8.58□□□□□ -1.04
ECHDC1-209ENST00000454591 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
ECHDC1-209ENST00000454591 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
ECHDC1-209ENST00000454591 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
ECHDC1-209ENST00000454591 LELP1Q5T871 98 aa8.57□□□□□ -1.04
ECHDC1-209ENST00000454591 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-209ENST00000454591 KLK5Q9Y337 293 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-209ENST00000454591 HIVEP2P31629 2446 aa8.57□□□□□ -1.04
ECHDC1-209ENST00000454591 REG3AQ06141 175 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 UNC79Q9P2D8 2635 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 C2CD3Q4AC94 2353 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
ECHDC1-209ENST00000454591 A0A087WYN8 130 aa8.55□□□□□ -1.04
ECHDC1-209ENST00000454591 DNAL4O96015 105 aa8.55□□□□□ -1.04
ECHDC1-209ENST00000454591 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
ECHDC1-209ENST00000454591 PRR34Q9NV39 138 aa8.55□□□□□ -1.04
ECHDC1-209ENST00000454591 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
ECHDC1-209ENST00000454591 MTORP42345 2549 aa8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 NANOS2P60321 138 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 Q9HAA7 133 aa8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
ECHDC1-209ENST00000454591 ANGP03950 147 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-209ENST00000454591 SMCR5Q8TEV8 140 aa8.53□□□□□ -1.04
ECHDC1-209ENST00000454591 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
ECHDC1-209ENST00000454591 CUBNO60494 3623 aa8.52□□□□□ -1.04
ECHDC1-209ENST00000454591 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 A0A096LPF7 62 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 H3BNG1 76 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 OR13C6PQ8NH95 151 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 HECTD1Q9ULT8 2610 aa8.52□□□□□ -1.05
ECHDC1-209ENST00000454591 LECT2O14960 151 aa8.51□□□□□ -1.05
ECHDC1-209ENST00000454591 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
ECHDC1-209ENST00000454591 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
ECHDC1-209ENST00000454591 SETD2Q9BYW2 2564 aaPredicted RBP8.49□□□□□ -1.05
ECHDC1-209ENST00000454591 C11orf68Q9H3H3 251 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-209ENST00000454591 DEFB4AO15263 64 aa8.49□□□□□ -1.05
ECHDC1-209ENST00000454591 Q8N814 137 aa8.48□□□□□ -1.05
ECHDC1-209ENST00000454591 JMJD7-PLA2G4BH0Y9G9 81 aa8.47□□□□□ -1.05
ECHDC1-209ENST00000454591 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
ECHDC1-209ENST00000454591 Q8N3U1 123 aa8.47□□□□□ -1.05
ECHDC1-209ENST00000454591 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.05
ECHDC1-209ENST00000454591 Q6JHZ5 121 aa8.46□□□□□ -1.05
ECHDC1-209ENST00000454591 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.05
ECHDC1-209ENST00000454591 ENHOQ6UWT2 76 aa8.46□□□□□ -1.05
ECHDC1-209ENST00000454591 IGLV10-54A0A075B6I4 117 aa8.45□□□□□ -1.06
ECHDC1-209ENST00000454591 TMEM256-PLSCR3K7ERE1 68 aa8.45□□□□□ -1.06
ECHDC1-209ENST00000454591 LYPD5Q6UWN5 251 aa8.45□□□□□ -1.06
ECHDC1-209ENST00000454591 CYSRT1A8MQ03 144 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 H3BQ85 93 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 FN1P02751 2386 aaKnown RBP8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 CCKP06307 115 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 HIST1H4AP62805 103 aaKnown RBP8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 LINC00575Q6W349 94 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 Q8NDZ9 215 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 C14orf132Q9NPU4 83 aa8.44□□□□□ -1.06
ECHDC1-209ENST00000454591 C9orf116Q5BN46 136 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-209ENST00000454591 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
ECHDC1-209ENST00000454591 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
ECHDC1-209ENST00000454591 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
ECHDC1-209ENST00000454591 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-209ENST00000454591 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms