RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
TRAPPC12-211ENST00000452495 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
TRAPPC12-211ENST00000452495 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 DPM2O94777 84 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 S100A2P29034 98 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 CKS1BP61024 79 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
TRAPPC12-211ENST00000452495 TRBV30A0A0K0K1B3 111 aa9.38□□□□□ -0.91
TRAPPC12-211ENST00000452495 TMEM223A0PJW6 202 aa9.38□□□□□ -0.91
TRAPPC12-211ENST00000452495 C3orf79P0CE67 100 aa9.38□□□□□ -0.91
TRAPPC12-211ENST00000452495 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
TRAPPC12-211ENST00000452495 IGKCP01834 107 aa9.37□□□□□ -0.91
TRAPPC12-211ENST00000452495 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
TRAPPC12-211ENST00000452495 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 KRTDAPP60985 99 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 PMCHL2Q9BQD1 86 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
TRAPPC12-211ENST00000452495 C20orf202A1L168 122 aa9.35□□□□□ -0.91
TRAPPC12-211ENST00000452495 SNRPEP62304 92 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-211ENST00000452495 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
TRAPPC12-211ENST00000452495 LOC100996750A0A140TA64 210 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 AKR1D1P51857 326 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 HERVK_113P61574 105 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 CIRBPQ14011 172 aaKnown RBP9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 KRTAP4-6Q9BYQ5 205 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 LRP1BQ9NZR2 4599 aa9.34□□□□□ -0.91
TRAPPC12-211ENST00000452495 FAM30AQ9NZY2 134 aa9.33□□□□□ -0.92
TRAPPC12-211ENST00000452495 A0A096LNI7 61 aa9.32□□□□□ -0.92
TRAPPC12-211ENST00000452495 SPACA4Q8TDM5 124 aa9.32□□□□□ -0.92
TRAPPC12-211ENST00000452495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-211ENST00000452495 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
TRAPPC12-211ENST00000452495 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-211ENST00000452495 IGKV2-24A0A0C4DH68 120 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 LEPROTO15243 131 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 XGP55808 180 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
TRAPPC12-211ENST00000452495 PANO1I0J062 215 aa9.29□□□□□ -0.92
TRAPPC12-211ENST00000452495 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC12-211ENST00000452495 KIAA1109Q2LD37 5005 aa9.28□□□□□ -0.92
TRAPPC12-211ENST00000452495 E9PLD3 99 aa9.28□□□□□ -0.92
TRAPPC12-211ENST00000452495 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
TRAPPC12-211ENST00000452495 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
TRAPPC12-211ENST00000452495 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-211ENST00000452495 Q6ZRP5 223 aa9.27□□□□□ -0.93
TRAPPC12-211ENST00000452495 CIRBP-AS1Q8TBR5 109 aa9.27□□□□□ -0.93
TRAPPC12-211ENST00000452495 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-211ENST00000452495 J3QQQ9 107 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 NMUP48645 174 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 HERV-K104P63124 156 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 HAMPP81172 84 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 COX17Q14061 63 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 TMA7Q9Y2S6 64 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-211ENST00000452495 A0A087WYN8 130 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 MYMXA0A1B0GTQ4 84 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 RYR1P21817 5038 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
TRAPPC12-211ENST00000452495 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
TRAPPC12-211ENST00000452495 STPG4Q8N801 248 aa9.24□□□□□ -0.93
TRAPPC12-211ENST00000452495 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
TRAPPC12-211ENST00000452495 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
TRAPPC12-211ENST00000452495 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
TRAPPC12-211ENST00000452495 ATOH7Q8N100 152 aa9.22□□□□□ -0.93
TRAPPC12-211ENST00000452495 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
TRAPPC12-211ENST00000452495 PFN2P35080 140 aa9.21□□□□□ -0.94
TRAPPC12-211ENST00000452495 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
TRAPPC12-211ENST00000452495 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
TRAPPC12-211ENST00000452495 HSPG2P98160 4391 aa9.2□□□□□ -0.94
TRAPPC12-211ENST00000452495 Q8N1X5 172 aa9.19□□□□□ -0.94
TRAPPC12-211ENST00000452495 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
TRAPPC12-211ENST00000452495 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
TRAPPC12-211ENST00000452495 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
TRAPPC12-211ENST00000452495 SCGB1D1O95968 90 aa9.18□□□□□ -0.94
TRAPPC12-211ENST00000452495 LINC00158P58513 81 aa9.18□□□□□ -0.94
TRAPPC12-211ENST00000452495 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
TRAPPC12-211ENST00000452495 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
TRAPPC12-211ENST00000452495 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
TRAPPC12-211ENST00000452495 ZNF815PA8K554 130 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms