RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 CKS1BP61024 79 aa8.46□□□□□ -1.06
SNHG4-201ENST00000448190 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
SNHG4-201ENST00000448190 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
SNHG4-201ENST00000448190 SMIM1B2RUZ4 78 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 F8WDY8 70 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 H0Y8G0 127 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 ATP6V1G1O75348 118 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
SNHG4-201ENST00000448190 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
SNHG4-201ENST00000448190 Q8IZM0 81 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 PLAC8Q9NZF1 115 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
SNHG4-201ENST00000448190 A0A1W2PNN7 141 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 H3BRM9 83 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 LEPROTL1O95214 131 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 Q6ZRP5 223 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 COX7B2Q8TF08 81 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
SNHG4-201ENST00000448190 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
SNHG4-201ENST00000448190 S100A1P23297 94 aa8.42□□□□□ -1.06
SNHG4-201ENST00000448190 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
SNHG4-201ENST00000448190 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
SNHG4-201ENST00000448190 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
SNHG4-201ENST00000448190 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
SNHG4-201ENST00000448190 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
SNHG4-201ENST00000448190 F8VRH5 84 aa8.39□□□□□ -1.07
SNHG4-201ENST00000448190 TLX1NBP0CAT3 122 aa8.39□□□□□ -1.07
SNHG4-201ENST00000448190 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
SNHG4-201ENST00000448190 PMCHL2Q9BQD1 86 aa8.39□□□□□ -1.07
SNHG4-201ENST00000448190 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
SNHG4-201ENST00000448190 IGLV5-39A0A0G2JS06 123 aa8.38□□□□□ -1.07
SNHG4-201ENST00000448190 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
SNHG4-201ENST00000448190 ODF1Q14990 250 aa8.37□□□□□ -1.07
SNHG4-201ENST00000448190 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
SNHG4-201ENST00000448190 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
SNHG4-201ENST00000448190 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
SNHG4-201ENST00000448190 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
SNHG4-201ENST00000448190 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
SNHG4-201ENST00000448190 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
SNHG4-201ENST00000448190 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
SNHG4-201ENST00000448190 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
SNHG4-201ENST00000448190 CXCL5P42830 114 aa8.35□□□□□ -1.07
SNHG4-201ENST00000448190 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
SNHG4-201ENST00000448190 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
SNHG4-201ENST00000448190 PFN2P35080 140 aa8.34□□□□□ -1.07
SNHG4-201ENST00000448190 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
SNHG4-201ENST00000448190 DPM2O94777 84 aa8.32□□□□□ -1.08
SNHG4-201ENST00000448190 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
SNHG4-201ENST00000448190 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
SNHG4-201ENST00000448190 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
SNHG4-201ENST00000448190 SYS1-DBNDD2H3BUS1 97 aa8.3□□□□□ -1.08
SNHG4-201ENST00000448190 IGKCP01834 107 aa8.3□□□□□ -1.08
SNHG4-201ENST00000448190 PLNP26678 52 aa8.3□□□□□ -1.08
SNHG4-201ENST00000448190 COA6Q5JTJ3 125 aaKnown RBP8.3□□□□□ -1.08
SNHG4-201ENST00000448190 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
SNHG4-201ENST00000448190 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
SNHG4-201ENST00000448190 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
SNHG4-201ENST00000448190 PRR3P79522 188 aaKnown RBP8.29□□□□□ -1.08
SNHG4-201ENST00000448190 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
SNHG4-201ENST00000448190 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 M0QXV9 152 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 C3orf79P0CE67 100 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 LINC00158P58513 81 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 KRTDAPP60985 99 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
SNHG4-201ENST00000448190 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
SNHG4-201ENST00000448190 LEPROTO15243 131 aa8.26□□□□□ -1.09
SNHG4-201ENST00000448190 UBE2BP63146 152 aa8.26□□□□□ -1.09
SNHG4-201ENST00000448190 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
SNHG4-201ENST00000448190 NDUFA12Q9UI09 145 aa8.26□□□□□ -1.09
SNHG4-201ENST00000448190 HERC1Q15751 4861 aa8.26□□□□□ -1.09
SNHG4-201ENST00000448190 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
SNHG4-201ENST00000448190 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
SNHG4-201ENST00000448190 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
SNHG4-201ENST00000448190 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 J3QQQ9 107 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 HERVK_113P61574 105 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
SNHG4-201ENST00000448190 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
SNHG4-201ENST00000448190 RPL37AP8A6NKH3 93 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms