RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 SMIM6P0DI80 62 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 XGP55808 180 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 Q6ZSA8 131 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 Q8IZM0 81 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 MAP1LC3CQ9BXW4 147 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 C6orf48Q9UBA6 75 aa8.5□□□□□ -1.05
HLA-DOB-207ENST00000447394 A0A096LNI7 61 aa8.49□□□□□ -1.05
HLA-DOB-207ENST00000447394 NDUFA1O15239 70 aa8.49□□□□□ -1.05
HLA-DOB-207ENST00000447394 PRSS2P07478 247 aa8.49□□□□□ -1.05
HLA-DOB-207ENST00000447394 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
HLA-DOB-207ENST00000447394 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 IGLV5-39A0A0G2JS06 123 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 C3orf79P0CE67 100 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 KRTDAPP60985 99 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
HLA-DOB-207ENST00000447394 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
HLA-DOB-207ENST00000447394 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
HLA-DOB-207ENST00000447394 SNRPEP62304 92 aaKnown RBP8.47□□□□□ -1.05
HLA-DOB-207ENST00000447394 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
HLA-DOB-207ENST00000447394 C12orf57Q99622 126 aa8.47□□□□□ -1.05
HLA-DOB-207ENST00000447394 DPM2O94777 84 aa8.46□□□□□ -1.06
HLA-DOB-207ENST00000447394 S100A6P06703 90 aa8.46□□□□□ -1.06
HLA-DOB-207ENST00000447394 CKS1BP61024 79 aa8.46□□□□□ -1.06
HLA-DOB-207ENST00000447394 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.06
HLA-DOB-207ENST00000447394 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.06
HLA-DOB-207ENST00000447394 IGKCP01834 107 aa8.45□□□□□ -1.06
HLA-DOB-207ENST00000447394 GAGE2BQ13066 116 aa8.45□□□□□ -1.06
HLA-DOB-207ENST00000447394 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
HLA-DOB-207ENST00000447394 PLNP26678 52 aa8.44□□□□□ -1.06
HLA-DOB-207ENST00000447394 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
HLA-DOB-207ENST00000447394 CIRBP-AS1Q8TBR5 109 aa8.44□□□□□ -1.06
HLA-DOB-207ENST00000447394 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
HLA-DOB-207ENST00000447394 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 F8WDY8 70 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 S100A2P29034 98 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 CIRBPQ14011 172 aaKnown RBP8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 Q6ZRP5 223 aa8.43□□□□□ -1.06
HLA-DOB-207ENST00000447394 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
HLA-DOB-207ENST00000447394 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
HLA-DOB-207ENST00000447394 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
HLA-DOB-207ENST00000447394 A0A087WYN8 130 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 CXCL5P42830 114 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 AKR1D1P51857 326 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 GAGE2EQ4V326 116 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 GAGE2DQ9UEU5 116 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 FAT1Q14517 4588 aa8.41□□□□□ -1.06
HLA-DOB-207ENST00000447394 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
HLA-DOB-207ENST00000447394 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
HLA-DOB-207ENST00000447394 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
HLA-DOB-207ENST00000447394 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
HLA-DOB-207ENST00000447394 TLX1NBP0CAT3 122 aa8.39□□□□□ -1.07
HLA-DOB-207ENST00000447394 STPG4Q8N801 248 aa8.39□□□□□ -1.07
HLA-DOB-207ENST00000447394 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 LEPROTO15243 131 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 PFN2P35080 140 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 HERVK_113P61574 105 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 C9orf129Q5T035 196 aaKnown RBP8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
HLA-DOB-207ENST00000447394 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 IGKV2D-26A0A0A0MRZ7 120 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 C20orf202A1L168 122 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
HLA-DOB-207ENST00000447394 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 J3QQQ9 107 aa8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
HLA-DOB-207ENST00000447394 E9PLD3 99 aa8.34□□□□□ -1.07
HLA-DOB-207ENST00000447394 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
HLA-DOB-207ENST00000447394 Q8N1X5 172 aa8.34□□□□□ -1.07
HLA-DOB-207ENST00000447394 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
HLA-DOB-207ENST00000447394 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
HLA-DOB-207ENST00000447394 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
HLA-DOB-207ENST00000447394 LGALS3P17931 250 aaKnown RBP8.33□□□□□ -1.08
HLA-DOB-207ENST00000447394 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
HLA-DOB-207ENST00000447394 Q5VSD8 79 aa8.33□□□□□ -1.08
HLA-DOB-207ENST00000447394 MYMXA0A1B0GTQ4 84 aa8.31□□□□□ -1.08
HLA-DOB-207ENST00000447394 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
HLA-DOB-207ENST00000447394 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
HLA-DOB-207ENST00000447394 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
HLA-DOB-207ENST00000447394 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
HLA-DOB-207ENST00000447394 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
HLA-DOB-207ENST00000447394 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
HLA-DOB-207ENST00000447394 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms