RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
RFC4-208ENST00000447345 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
RFC4-208ENST00000447345 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
RFC4-208ENST00000447345 CKS1BP61024 79 aa7.55□□□□□ -1.2
RFC4-208ENST00000447345 F8WDY8 70 aa7.54□□□□□ -1.2
RFC4-208ENST00000447345 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
RFC4-208ENST00000447345 C6orf226Q5I0X4 101 aa7.54□□□□□ -1.2
RFC4-208ENST00000447345 Q8IZM0 81 aa7.54□□□□□ -1.2
RFC4-208ENST00000447345 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
RFC4-208ENST00000447345 H0Y8G0 127 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 H3BRM9 83 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 NUPR1O60356 82 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
RFC4-208ENST00000447345 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
RFC4-208ENST00000447345 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 C9orf116Q5BN46 136 aaPredicted RBP7.53□□□□□ -1.2
RFC4-208ENST00000447345 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
RFC4-208ENST00000447345 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
RFC4-208ENST00000447345 TRBV30A0A0K0K1B3 111 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 C11orf86A6NJI1 115 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 ATP6V1G1O75348 118 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 COX7B2Q8TF08 81 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BKO60814 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BJP06899 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 FABP4P15090 132 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BOP23527 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BBP33778 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BDP58876 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BCP62807 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST2H2BEQ16778 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.51□□□□□ -1.21
RFC4-208ENST00000447345 TMEM170BQ5T4T1 132 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 Q6ZRP5 223 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BHQ93079 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BNQ99877 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 HIST1H2BMQ99879 126 aa7.51□□□□□ -1.21
RFC4-208ENST00000447345 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
RFC4-208ENST00000447345 LEPROTL1O95214 131 aa7.5□□□□□ -1.21
RFC4-208ENST00000447345 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 F8VRH5 84 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 CXCL5P42830 114 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 KRTAP10-4P60372 401 aaPredicted RBP7.49□□□□□ -1.21
RFC4-208ENST00000447345 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
RFC4-208ENST00000447345 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
RFC4-208ENST00000447345 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
RFC4-208ENST00000447345 S100A1P23297 94 aa7.47□□□□□ -1.21
RFC4-208ENST00000447345 HSPB8Q9UJY1 196 aa7.47□□□□□ -1.21
RFC4-208ENST00000447345 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
RFC4-208ENST00000447345 ODF1Q14990 250 aa7.46□□□□□ -1.22
RFC4-208ENST00000447345 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
RFC4-208ENST00000447345 XAGE1AQ9HD64 81 aa7.46□□□□□ -1.22
RFC4-208ENST00000447345 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
RFC4-208ENST00000447345 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
RFC4-208ENST00000447345 PMCHL2Q9BQD1 86 aa7.45□□□□□ -1.22
RFC4-208ENST00000447345 TMEM223A0PJW6 202 aa7.44□□□□□ -1.22
RFC4-208ENST00000447345 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
RFC4-208ENST00000447345 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
RFC4-208ENST00000447345 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
RFC4-208ENST00000447345 PFN2P35080 140 aa7.43□□□□□ -1.22
RFC4-208ENST00000447345 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
RFC4-208ENST00000447345 M0QXV9 152 aa7.42□□□□□ -1.22
RFC4-208ENST00000447345 KRTAP7-1Q8IUC3 87 aa7.42□□□□□ -1.22
RFC4-208ENST00000447345 DPM2O94777 84 aa7.41□□□□□ -1.22
RFC4-208ENST00000447345 PLNP26678 52 aa7.41□□□□□ -1.22
RFC4-208ENST00000447345 SERTAD4-AS1Q5TG53 156 aa7.41□□□□□ -1.22
RFC4-208ENST00000447345 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
RFC4-208ENST00000447345 IGKCP01834 107 aa7.39□□□□□ -1.23
RFC4-208ENST00000447345 UBE2BP63146 152 aa7.39□□□□□ -1.23
RFC4-208ENST00000447345 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
RFC4-208ENST00000447345 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
RFC4-208ENST00000447345 A0A0U1RRA0 63 aa7.38□□□□□ -1.23
RFC4-208ENST00000447345 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
RFC4-208ENST00000447345 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
RFC4-208ENST00000447345 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
RFC4-208ENST00000447345 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
RFC4-208ENST00000447345 KRTAP11-1Q8IUC1 163 aa7.38□□□□□ -1.23
RFC4-208ENST00000447345 HERVK_113P61574 105 aa7.37□□□□□ -1.23
RFC4-208ENST00000447345 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
RFC4-208ENST00000447345 C3orf79P0CE67 100 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 LINC00158P58513 81 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 KRTDAPP60985 99 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 MEIG1Q5JSS6 88 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 NDUFA12Q9UI09 145 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 C22orf24Q9Y442 160 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
RFC4-208ENST00000447345 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
RFC4-208ENST00000447345 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
RFC4-208ENST00000447345 J3QL48 77 aa7.35□□□□□ -1.23
RFC4-208ENST00000447345 LEPROTO15243 131 aa7.35□□□□□ -1.23
RFC4-208ENST00000447345 COX17Q14061 63 aa7.35□□□□□ -1.23
RFC4-208ENST00000447345 PLEKHB2Q96CS7 222 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms