RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 FAM104BQ5XKR9 115 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 Q6ZUT4 128 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
PTPRN-208ENST00000446182 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
PTPRN-208ENST00000446182 NRACQ8N912 160 aa6.35□□□□□ -1.39
PTPRN-208ENST00000446182 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
PTPRN-208ENST00000446182 H0Y9J4 135 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 G0S2P27469 103 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 SUMO2P61956 95 aaKnown RBP6.34□□□□□ -1.39
PTPRN-208ENST00000446182 SMAGPQ0VAQ4 97 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 TIMM21Q9BVV7 248 aa6.34□□□□□ -1.39
PTPRN-208ENST00000446182 NXT2Q9NPJ8 142 aaKnown RBP6.34□□□□□ -1.39
PTPRN-208ENST00000446182 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
PTPRN-208ENST00000446182 A0A087WZ39 114 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 URB1-AS1Q96HZ7 61 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 KIR2DL4Q99706 377 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 MAP1LC3CQ9BXW4 147 aa6.33□□□□□ -1.4
PTPRN-208ENST00000446182 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 LINC01546A6NGU7 62 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 F8WDY8 70 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 DDTP30046 118 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 CKS2P33552 79 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 PET117Q6UWS5 81 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 FAM104AQ969W3 186 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
PTPRN-208ENST00000446182 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
PTPRN-208ENST00000446182 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
PTPRN-208ENST00000446182 KRTDAPP60985 99 aa6.31□□□□□ -1.4
PTPRN-208ENST00000446182 FAM19A5Q7Z5A7 132 aaPredicted RBP6.31□□□□□ -1.4
PTPRN-208ENST00000446182 KRTAP7-1Q8IUC3 87 aa6.31□□□□□ -1.4
PTPRN-208ENST00000446182 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
PTPRN-208ENST00000446182 HSBP1L1C9JCN9 74 aa6.3□□□□□ -1.4
PTPRN-208ENST00000446182 NDUFA1O15239 70 aa6.3□□□□□ -1.4
PTPRN-208ENST00000446182 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
PTPRN-208ENST00000446182 UNQ6190/PRO20217Q6UXQ8 127 aa6.3□□□□□ -1.4
PTPRN-208ENST00000446182 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
PTPRN-208ENST00000446182 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
PTPRN-208ENST00000446182 D6R8Y8 96 aa6.29□□□□□ -1.4
PTPRN-208ENST00000446182 TCAPO15273 167 aa6.29□□□□□ -1.4
PTPRN-208ENST00000446182 C3orf79P0CE67 100 aa6.29□□□□□ -1.4
PTPRN-208ENST00000446182 RPL32P62910 135 aaKnown RBP6.29□□□□□ -1.4
PTPRN-208ENST00000446182 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
PTPRN-208ENST00000446182 MIEN1Q9BRT3 115 aa6.29□□□□□ -1.4
PTPRN-208ENST00000446182 CRCT1Q9UGL9 99 aa6.29□□□□□ -1.4
PTPRN-208ENST00000446182 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 M0QXV9 152 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 HBDP02042 147 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 CTAG1AP78358 180 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
PTPRN-208ENST00000446182 PRR4Q16378 134 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 GAGE2EQ4V326 116 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 FAM19A2Q8N3H0 131 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 UQCR10Q9UDW1 63 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 GAGE2DQ9UEU5 116 aa6.28□□□□□ -1.4
PTPRN-208ENST00000446182 LINC00587B1AMM8 73 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 ATP5LO75964 103 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 UBE2D1P51668 147 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 UBE2BP63146 152 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 Q8N8P6 123 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
PTPRN-208ENST00000446182 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
PTPRN-208ENST00000446182 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
PTPRN-208ENST00000446182 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
PTPRN-208ENST00000446182 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
PTPRN-208ENST00000446182 M0R143 59 aa6.25□□□□□ -1.41
PTPRN-208ENST00000446182 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
PTPRN-208ENST00000446182 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
PTPRN-208ENST00000446182 TRBV30A0A0K0K1B3 111 aa6.24□□□□□ -1.41
PTPRN-208ENST00000446182 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
PTPRN-208ENST00000446182 NPYP01303 97 aa6.24□□□□□ -1.41
PTPRN-208ENST00000446182 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
PTPRN-208ENST00000446182 C2orf82Q6UX34 121 aa6.24□□□□□ -1.41
PTPRN-208ENST00000446182 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
PTPRN-208ENST00000446182 A0A096LNJ9 63 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 PRO1933Q9H354 126 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
PTPRN-208ENST00000446182 IGLV4-3A0A075B6K6 122 aa6.22□□□□□ -1.41
PTPRN-208ENST00000446182 A0A0U1RQV1 116 aa6.22□□□□□ -1.41
PTPRN-208ENST00000446182 ZNF861PO60384 105 aa6.22□□□□□ -1.41
PTPRN-208ENST00000446182 IGLC3P0DOY3 106 aa6.22□□□□□ -1.41
PTPRN-208ENST00000446182 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
PTPRN-208ENST00000446182 LINC01561Q8N1V8 128 aa6.21□□□□□ -1.42
PTPRN-208ENST00000446182 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms