RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 A0A096LNT2 108 aa9.73□□□□□ -0.85
VPS52-212ENST00000445902 Q8N814 137 aa9.73□□□□□ -0.85
VPS52-212ENST00000445902 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
VPS52-212ENST00000445902 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
VPS52-212ENST00000445902 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
VPS52-212ENST00000445902 S100A7L2Q5SY68 101 aa9.72□□□□□ -0.85
VPS52-212ENST00000445902 CR1P17927 2039 aa9.72□□□□□ -0.85
VPS52-212ENST00000445902 NDUFC2O95298 119 aa9.72□□□□□ -0.85
VPS52-212ENST00000445902 A0A087WZ39 114 aa9.71□□□□□ -0.85
VPS52-212ENST00000445902 TRGV4A0A0C4DH28 118 aa9.71□□□□□ -0.85
VPS52-212ENST00000445902 NANOS2P60321 138 aaKnown RBP9.71□□□□□ -0.85
VPS52-212ENST00000445902 UBL5Q9BZL1 73 aa9.71□□□□□ -0.85
VPS52-212ENST00000445902 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.86
VPS52-212ENST00000445902 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.86
VPS52-212ENST00000445902 LY6G6DO95868 133 aa9.71□□□□□ -0.86
VPS52-212ENST00000445902 SNURFQ9Y675 71 aa9.71□□□□□ -0.86
VPS52-212ENST00000445902 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
VPS52-212ENST00000445902 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
VPS52-212ENST00000445902 M0R2N4 97 aa9.7□□□□□ -0.86
VPS52-212ENST00000445902 TMEM86BQ8N661 226 aa9.69□□□□□ -0.86
VPS52-212ENST00000445902 WFDC10AQ9H1F0 79 aa9.69□□□□□ -0.86
VPS52-212ENST00000445902 APCP25054 2843 aa9.69□□□□□ -0.86
VPS52-212ENST00000445902 TMEM256-PLSCR3K7ERE1 68 aa9.69□□□□□ -0.86
VPS52-212ENST00000445902 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 TRBV6-8A0A0A6YYG3 113 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 ATP5EP2Q5VTU8 51 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 NBEAL2Q6ZNJ1 2754 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 HAMPP81172 84 aa9.68□□□□□ -0.86
VPS52-212ENST00000445902 RPL35AP18077 110 aaKnown RBP9.67□□□□□ -0.86
VPS52-212ENST00000445902 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
VPS52-212ENST00000445902 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
VPS52-212ENST00000445902 MYO18BQ8IUG5 2567 aa9.67□□□□□ -0.86
VPS52-212ENST00000445902 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 H7BZZ5 65 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 RMI2Q96E14 147 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 LINC00167Q96N53 147 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
VPS52-212ENST00000445902 GCN1Q92616 2671 aaKnown RBP9.65□□□□□ -0.86
VPS52-212ENST00000445902 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
VPS52-212ENST00000445902 LINC01356Q8N9X3 169 aa9.65□□□□□ -0.86
VPS52-212ENST00000445902 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.87
VPS52-212ENST00000445902 Q6YL49 198 aa9.65□□□□□ -0.87
VPS52-212ENST00000445902 SPATA3Q8NHX4 192 aa9.65□□□□□ -0.87
VPS52-212ENST00000445902 C4orf3Q8WVX3 66 aa9.65□□□□□ -0.87
VPS52-212ENST00000445902 LAMTOR3Q9UHA4 124 aa9.65□□□□□ -0.87
VPS52-212ENST00000445902 ABCA12Q86UK0 2595 aa9.64□□□□□ -0.87
VPS52-212ENST00000445902 A0A096LPF7 62 aa9.64□□□□□ -0.87
VPS52-212ENST00000445902 ACACBO00763 2458 aa9.64□□□□□ -0.87
VPS52-212ENST00000445902 Q8NDZ9 215 aa9.64□□□□□ -0.87
VPS52-212ENST00000445902 DOPEY1Q5JWR5 2465 aa9.63□□□□□ -0.87
VPS52-212ENST00000445902 SCXQ7RTU7 201 aa9.63□□□□□ -0.87
VPS52-212ENST00000445902 LINC01547P58512 204 aaPredicted RBP9.63□□□□□ -0.87
VPS52-212ENST00000445902 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
VPS52-212ENST00000445902 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
VPS52-212ENST00000445902 F8WEM9 126 aa9.62□□□□□ -0.87
VPS52-212ENST00000445902 Q6ZQT0 140 aa9.62□□□□□ -0.87
VPS52-212ENST00000445902 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
VPS52-212ENST00000445902 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
VPS52-212ENST00000445902 TRAV7A0A075B6U4 112 aa9.61□□□□□ -0.87
VPS52-212ENST00000445902 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
VPS52-212ENST00000445902 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
VPS52-212ENST00000445902 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 WFDC11Q8NEX6 87 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 TRBV10-3A0A0K0K1G6 114 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 Q6ZVQ6 151 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 Q8IZM0 81 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
VPS52-212ENST00000445902 PRB1P04280 392 aa9.59□□□□□ -0.87
VPS52-212ENST00000445902 C1orf43Q9BWL3 253 aa9.58□□□□□ -0.88
VPS52-212ENST00000445902 LINC00474Q9P2X8 69 aa9.58□□□□□ -0.88
VPS52-212ENST00000445902 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
VPS52-212ENST00000445902 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
VPS52-212ENST00000445902 Q8N3U1 123 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 MRAPQ8TCY5 172 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 LINC00482Q8N8I6 264 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 TM2D3Q9BRN9 247 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 CACNA1AO00555 2505 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 CCDC168Q8NDH2 2452 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
VPS52-212ENST00000445902 GYPEP15421 78 aa9.56□□□□□ -0.88
VPS52-212ENST00000445902 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
VPS52-212ENST00000445902 Q6ZQY7 126 aa9.56□□□□□ -0.88
VPS52-212ENST00000445902 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
VPS52-212ENST00000445902 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
VPS52-212ENST00000445902 PRO0628Q9UI54 55 aa9.55□□□□□ -0.88
VPS52-212ENST00000445902 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
VPS52-212ENST00000445902 ZNF469Q96JG9 3925 aaPredicted RBP9.54□□□□□ -0.88
VPS52-212ENST00000445902 J3QLI3 93 aa9.54□□□□□ -0.88
VPS52-212ENST00000445902 CCL24O00175 119 aa9.53□□□□□ -0.88
VPS52-212ENST00000445902 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
VPS52-212ENST00000445902 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
VPS52-212ENST00000445902 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.88
VPS52-212ENST00000445902 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
VPS52-212ENST00000445902 TRBV7-6A0A0J9YX20 115 aa9.51□□□□□ -0.89
VPS52-212ENST00000445902 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms