RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ATP5LO75964 103 aa8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 Q8IZM0 81 aa8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
PDLIM2-212ENST00000443561 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 NDUFA1O15239 70 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 SEC11AP67812 179 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 MAJINQ3KP22 176 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 Q6ZRP5 223 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
PDLIM2-212ENST00000443561 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 F8WDY8 70 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 HSBP1O75506 76 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 TOMM7Q9P0U1 55 aa8.06□□□□□ -1.12
PDLIM2-212ENST00000443561 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 NDUFA6P56556 154 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 GAGE2BQ13066 116 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 ODF1Q14990 250 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 STPG4Q8N801 248 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
PDLIM2-212ENST00000443561 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
PDLIM2-212ENST00000443561 FAM168BA1KXE4 195 aa8.03□□□□□ -1.12
PDLIM2-212ENST00000443561 RPL18AQ02543 176 aaKnown RBP8.03□□□□□ -1.12
PDLIM2-212ENST00000443561 COX7B2Q8TF08 81 aa8.03□□□□□ -1.12
PDLIM2-212ENST00000443561 CHTOPQ9Y3Y2 248 aaKnown RBP8.03□□□□□ -1.12
PDLIM2-212ENST00000443561 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
PDLIM2-212ENST00000443561 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
PDLIM2-212ENST00000443561 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
PDLIM2-212ENST00000443561 PACRGQ96M98 296 aaPredicted RBP8.02□□□□□ -1.13
PDLIM2-212ENST00000443561 HERC1Q15751 4861 aa8.02□□□□□ -1.13
PDLIM2-212ENST00000443561 F8VRH5 84 aa8.01□□□□□ -1.13
PDLIM2-212ENST00000443561 LEPROTL1O95214 131 aa8.01□□□□□ -1.13
PDLIM2-212ENST00000443561 S100A1P23297 94 aa8.01□□□□□ -1.13
PDLIM2-212ENST00000443561 COA6Q5JTJ3 125 aaKnown RBP8.01□□□□□ -1.13
PDLIM2-212ENST00000443561 TMEM223A0PJW6 202 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 NDUFC2-KCTD14E9PQ53 114 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 INAFM2P0DMQ5 153 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 FABP4P15090 132 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
PDLIM2-212ENST00000443561 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 PRSS2P07478 247 aa7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 PMCHL2Q9BQD1 86 aa7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
PDLIM2-212ENST00000443561 H0Y8G0 127 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 H3BRM9 83 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 CXCL5P42830 114 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 CKS1BP61024 79 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 TMEM170BQ5T4T1 132 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 ZNF625Q96I27 306 aaPredicted RBP7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
PDLIM2-212ENST00000443561 TSPEAR-AS2P59090 65 aa7.97□□□□□ -1.13
PDLIM2-212ENST00000443561 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
PDLIM2-212ENST00000443561 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
PDLIM2-212ENST00000443561 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
PDLIM2-212ENST00000443561 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
PDLIM2-212ENST00000443561 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
PDLIM2-212ENST00000443561 Q8NDZ9 215 aa7.95□□□□□ -1.14
PDLIM2-212ENST00000443561 HSPB8Q9UJY1 196 aa7.95□□□□□ -1.14
PDLIM2-212ENST00000443561 SYS1-DBNDD2H3BUS1 97 aa7.92□□□□□ -1.14
PDLIM2-212ENST00000443561 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
PDLIM2-212ENST00000443561 DPM2O94777 84 aa7.91□□□□□ -1.14
PDLIM2-212ENST00000443561 C3orf79P0CE67 100 aa7.91□□□□□ -1.14
PDLIM2-212ENST00000443561 C7orf33Q8WU49 177 aa7.91□□□□□ -1.14
PDLIM2-212ENST00000443561 PSORS1C2Q9UIG4 136 aa7.91□□□□□ -1.14
PDLIM2-212ENST00000443561 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
PDLIM2-212ENST00000443561 M0QXV9 152 aa7.9□□□□□ -1.14
PDLIM2-212ENST00000443561 IGKCP01834 107 aa7.9□□□□□ -1.14
PDLIM2-212ENST00000443561 MAP1LC3CQ9BXW4 147 aa7.9□□□□□ -1.14
PDLIM2-212ENST00000443561 PLNP26678 52 aa7.89□□□□□ -1.15
PDLIM2-212ENST00000443561 PFN2P35080 140 aa7.89□□□□□ -1.15
PDLIM2-212ENST00000443561 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 LEPROTO15243 131 aa7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 SRSF9Q13242 221 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
PDLIM2-212ENST00000443561 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
PDLIM2-212ENST00000443561 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
PDLIM2-212ENST00000443561 VPREB1P12018 145 aa7.86□□□□□ -1.15
PDLIM2-212ENST00000443561 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
PDLIM2-212ENST00000443561 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
PDLIM2-212ENST00000443561 TNXBP22105 4242 aa7.86□□□□□ -1.15
PDLIM2-212ENST00000443561 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
PDLIM2-212ENST00000443561 A0A0U1RRA0 63 aa7.85□□□□□ -1.15
PDLIM2-212ENST00000443561 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
PDLIM2-212ENST00000443561 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
PDLIM2-212ENST00000443561 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
PDLIM2-212ENST00000443561 E9PLD3 99 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms