RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 PMCHL1Q16048 86 aa11.48□□□□□ -0.57
SMPD4-210ENST00000441135 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
SMPD4-210ENST00000441135 STPG4Q8N801 248 aa11.48□□□□□ -0.57
SMPD4-210ENST00000441135 C7orf33Q8WU49 177 aa11.48□□□□□ -0.57
SMPD4-210ENST00000441135 C10orf25Q5T742 122 aa11.47□□□□□ -0.57
SMPD4-210ENST00000441135 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
SMPD4-210ENST00000441135 SMIM1B2RUZ4 78 aa11.46□□□□□ -0.57
SMPD4-210ENST00000441135 CXCL5P42830 114 aa11.46□□□□□ -0.57
SMPD4-210ENST00000441135 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
SMPD4-210ENST00000441135 BAGE3Q86Y29 109 aa11.46□□□□□ -0.57
SMPD4-210ENST00000441135 H3BRM9 83 aa11.45□□□□□ -0.58
SMPD4-210ENST00000441135 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
SMPD4-210ENST00000441135 C6orf226Q5I0X4 101 aa11.45□□□□□ -0.58
SMPD4-210ENST00000441135 HSBP1O75506 76 aa11.44□□□□□ -0.58
SMPD4-210ENST00000441135 RPL18AQ02543 176 aaKnown RBP11.44□□□□□ -0.58
SMPD4-210ENST00000441135 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
SMPD4-210ENST00000441135 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
SMPD4-210ENST00000441135 CKS1BP61024 79 aa11.43□□□□□ -0.58
SMPD4-210ENST00000441135 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
SMPD4-210ENST00000441135 TRAV12-1A0A0B4J245 112 aa11.42□□□□□ -0.58
SMPD4-210ENST00000441135 NDUFA6P56556 154 aa11.42□□□□□ -0.58
SMPD4-210ENST00000441135 IFI27L1Q96BM0 104 aa11.42□□□□□ -0.58
SMPD4-210ENST00000441135 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
SMPD4-210ENST00000441135 F8VRH5 84 aa11.41□□□□□ -0.58
SMPD4-210ENST00000441135 Q6ZRP5 223 aa11.41□□□□□ -0.58
SMPD4-210ENST00000441135 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
SMPD4-210ENST00000441135 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-210ENST00000441135 LINC00310P59036 64 aa11.4□□□□□ -0.58
SMPD4-210ENST00000441135 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
SMPD4-210ENST00000441135 SCO1O75880 301 aa11.39□□□□□ -0.59
SMPD4-210ENST00000441135 SERF1AO75920 110 aa11.39□□□□□ -0.59
SMPD4-210ENST00000441135 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
SMPD4-210ENST00000441135 FAT3Q8TDW7 4589 aa11.38□□□□□ -0.59
SMPD4-210ENST00000441135 SPINK8P0C7L1 97 aa11.38□□□□□ -0.59
SMPD4-210ENST00000441135 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-210ENST00000441135 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
SMPD4-210ENST00000441135 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
SMPD4-210ENST00000441135 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
SMPD4-210ENST00000441135 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
SMPD4-210ENST00000441135 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
SMPD4-210ENST00000441135 PRR3P79522 188 aaKnown RBP11.37□□□□□ -0.59
SMPD4-210ENST00000441135 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
SMPD4-210ENST00000441135 ODF1Q14990 250 aa11.35□□□□□ -0.59
SMPD4-210ENST00000441135 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
SMPD4-210ENST00000441135 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
SMPD4-210ENST00000441135 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
SMPD4-210ENST00000441135 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
SMPD4-210ENST00000441135 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 HIST1H2BMQ99879 126 aa11.32□□□□□ -0.6
SMPD4-210ENST00000441135 NUPR1O60356 82 aa11.31□□□□□ -0.6
SMPD4-210ENST00000441135 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
SMPD4-210ENST00000441135 MT1HL1P0DM35 61 aa11.3□□□□□ -0.6
SMPD4-210ENST00000441135 S100A1P23297 94 aa11.3□□□□□ -0.6
SMPD4-210ENST00000441135 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
SMPD4-210ENST00000441135 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
SMPD4-210ENST00000441135 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
SMPD4-210ENST00000441135 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
SMPD4-210ENST00000441135 FAM19A5Q7Z5A7 132 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-210ENST00000441135 KRTAP7-1Q8IUC3 87 aa11.27□□□□□ -0.61
SMPD4-210ENST00000441135 PLNP26678 52 aa11.26□□□□□ -0.61
SMPD4-210ENST00000441135 COX17Q14061 63 aa11.26□□□□□ -0.61
SMPD4-210ENST00000441135 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
SMPD4-210ENST00000441135 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
SMPD4-210ENST00000441135 M0QXV9 152 aa11.25□□□□□ -0.61
SMPD4-210ENST00000441135 FABP4P15090 132 aa11.25□□□□□ -0.61
SMPD4-210ENST00000441135 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
SMPD4-210ENST00000441135 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
SMPD4-210ENST00000441135 MAP1LC3CQ9BXW4 147 aa11.24□□□□□ -0.61
SMPD4-210ENST00000441135 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
SMPD4-210ENST00000441135 TP73-AS1Q9UF72 201 aa11.24□□□□□ -0.61
SMPD4-210ENST00000441135 LINC01600Q96MT4 127 aa11.23□□□□□ -0.61
SMPD4-210ENST00000441135 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
SMPD4-210ENST00000441135 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
SMPD4-210ENST00000441135 H0Y8G0 127 aa11.22□□□□□ -0.61
SMPD4-210ENST00000441135 REG3GQ6UW15 175 aa11.22□□□□□ -0.61
SMPD4-210ENST00000441135 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
SMPD4-210ENST00000441135 DPM2O94777 84 aa11.21□□□□□ -0.61
SMPD4-210ENST00000441135 IGLV5-37A0A075B6J1 123 aa11.2□□□□□ -0.62
SMPD4-210ENST00000441135 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMPD4-210ENST00000441135 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-210ENST00000441135 HERV-K104P63124 156 aa11.19□□□□□ -0.62
SMPD4-210ENST00000441135 C22orf24Q9Y442 160 aa11.19□□□□□ -0.62
SMPD4-210ENST00000441135 IGKCP01834 107 aa11.18□□□□□ -0.62
SMPD4-210ENST00000441135 PFN2P35080 140 aa11.18□□□□□ -0.62
SMPD4-210ENST00000441135 UBE2BP63146 152 aa11.18□□□□□ -0.62
SMPD4-210ENST00000441135 SYS1-DBNDD2H3BUS1 97 aa11.17□□□□□ -0.62
SMPD4-210ENST00000441135 HERVK_113P61574 105 aa11.17□□□□□ -0.62
SMPD4-210ENST00000441135 C1orf137Q5JT78 98 aa11.17□□□□□ -0.62
SMPD4-210ENST00000441135 PLEKHB2Q96CS7 222 aa11.17□□□□□ -0.62
SMPD4-210ENST00000441135 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms