RNA–Protein interactions for RNA: ENST00000440132.2

RNF220-205, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-205ENST00000440132 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
RNF220-205ENST00000440132 C6orf226Q5I0X4 101 aa12.26□□□□□ -0.45
RNF220-205ENST00000440132 TRBV30A0A0K0K1B3 111 aa12.25□□□□□ -0.45
RNF220-205ENST00000440132 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
RNF220-205ENST00000440132 TLX1NBP0CAT3 122 aa12.25□□□□□ -0.45
RNF220-205ENST00000440132 SCO1O75880 301 aa12.24□□□□□ -0.45
RNF220-205ENST00000440132 IGLC3P0DOY3 106 aa12.24□□□□□ -0.45
RNF220-205ENST00000440132 CKS1BP61024 79 aa12.24□□□□□ -0.45
RNF220-205ENST00000440132 HSBP1O75506 76 aa12.23□□□□□ -0.45
RNF220-205ENST00000440132 Q6ZRP5 223 aa12.22□□□□□ -0.45
RNF220-205ENST00000440132 C7orf33Q8WU49 177 aa12.22□□□□□ -0.45
RNF220-205ENST00000440132 H3BRM9 83 aa12.21□□□□□ -0.45
RNF220-205ENST00000440132 FAM19A2Q8N3H0 131 aa12.21□□□□□ -0.45
RNF220-205ENST00000440132 IFI27L1Q96BM0 104 aa12.21□□□□□ -0.45
RNF220-205ENST00000440132 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
RNF220-205ENST00000440132 SERF1AO75920 110 aa12.2□□□□□ -0.46
RNF220-205ENST00000440132 SPINK8P0C7L1 97 aa12.2□□□□□ -0.46
RNF220-205ENST00000440132 CXCL5P42830 114 aa12.2□□□□□ -0.46
RNF220-205ENST00000440132 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
RNF220-205ENST00000440132 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
RNF220-205ENST00000440132 LINC00310P59036 64 aa12.19□□□□□ -0.46
RNF220-205ENST00000440132 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
RNF220-205ENST00000440132 TRAV12-1A0A0B4J245 112 aa12.18□□□□□ -0.46
RNF220-205ENST00000440132 NDUFC2-KCTD14E9PQ53 114 aa12.18□□□□□ -0.46
RNF220-205ENST00000440132 F8VRH5 84 aa12.18□□□□□ -0.46
RNF220-205ENST00000440132 FLG2Q5D862 2391 aaPredicted RBP12.18□□□□□ -0.46
RNF220-205ENST00000440132 GAGE2EQ4V326 116 aa12.17□□□□□ -0.46
RNF220-205ENST00000440132 GAGE2DQ9UEU5 116 aa12.17□□□□□ -0.46
RNF220-205ENST00000440132 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
RNF220-205ENST00000440132 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
RNF220-205ENST00000440132 NUPR1O60356 82 aa12.15□□□□□ -0.46
RNF220-205ENST00000440132 IGLV5-39A0A0G2JS06 123 aa12.14□□□□□ -0.47
RNF220-205ENST00000440132 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
RNF220-205ENST00000440132 TMEM170BQ5T4T1 132 aa12.13□□□□□ -0.47
RNF220-205ENST00000440132 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
RNF220-205ENST00000440132 MYCBP2O75592 4640 aa12.12□□□□□ -0.47
RNF220-205ENST00000440132 FAM168BA1KXE4 195 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
RNF220-205ENST00000440132 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
RNF220-205ENST00000440132 PRR3P79522 188 aaKnown RBP12.1□□□□□ -0.47
RNF220-205ENST00000440132 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
RNF220-205ENST00000440132 HSPB8Q9UJY1 196 aa12.09□□□□□ -0.47
RNF220-205ENST00000440132 H0Y8G0 127 aa12.08□□□□□ -0.48
RNF220-205ENST00000440132 FABP4P15090 132 aa12.08□□□□□ -0.48
RNF220-205ENST00000440132 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.48
RNF220-205ENST00000440132 KRTAP7-1Q8IUC3 87 aa12.08□□□□□ -0.48
RNF220-205ENST00000440132 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
RNF220-205ENST00000440132 ODF1Q14990 250 aa12.07□□□□□ -0.48
RNF220-205ENST00000440132 S100A1P23297 94 aa12.06□□□□□ -0.48
RNF220-205ENST00000440132 KRTAP29-1A8MX34 341 aaPredicted RBP12.05□□□□□ -0.48
RNF220-205ENST00000440132 XAGE1AQ9HD64 81 aa12.05□□□□□ -0.48
RNF220-205ENST00000440132 PKHD1L1Q86WI1 4243 aa12.03□□□□□ -0.48
RNF220-205ENST00000440132 M0QXV9 152 aa12.03□□□□□ -0.48
RNF220-205ENST00000440132 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
RNF220-205ENST00000440132 PSORS1C2Q9UIG4 136 aa12.02□□□□□ -0.49
RNF220-205ENST00000440132 OXTP01178 125 aa12.01□□□□□ -0.49
RNF220-205ENST00000440132 PLNP26678 52 aa12.01□□□□□ -0.49
RNF220-205ENST00000440132 SERTAD4-AS1Q5TG53 156 aa12.01□□□□□ -0.49
RNF220-205ENST00000440132 ZNF625Q96I27 306 aaPredicted RBP12.01□□□□□ -0.49
RNF220-205ENST00000440132 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
RNF220-205ENST00000440132 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
RNF220-205ENST00000440132 ATP6V1G1O75348 118 aa12□□□□□ -0.49
RNF220-205ENST00000440132 PFN2P35080 140 aa12□□□□□ -0.49
RNF220-205ENST00000440132 COX17Q14061 63 aa12□□□□□ -0.49
RNF220-205ENST00000440132 ERG28Q9UKR5 140 aa12□□□□□ -0.49
RNF220-205ENST00000440132 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
RNF220-205ENST00000440132 J3QL48 77 aa11.99□□□□□ -0.49
RNF220-205ENST00000440132 DPM2O94777 84 aa11.98□□□□□ -0.49
RNF220-205ENST00000440132 KRTAP11-1Q8IUC1 163 aa11.98□□□□□ -0.49
RNF220-205ENST00000440132 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
RNF220-205ENST00000440132 C22orf24Q9Y442 160 aa11.98□□□□□ -0.49
RNF220-205ENST00000440132 UBE2BP63146 152 aa11.97□□□□□ -0.49
RNF220-205ENST00000440132 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
RNF220-205ENST00000440132 C1orf137Q5JT78 98 aa11.97□□□□□ -0.49
RNF220-205ENST00000440132 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
RNF220-205ENST00000440132 SPINK6Q6UWN8 80 aa11.97□□□□□ -0.49
RNF220-205ENST00000440132 PMCHL2Q9BQD1 86 aa11.97□□□□□ -0.49
RNF220-205ENST00000440132 IGKCP01834 107 aa11.96□□□□□ -0.49
RNF220-205ENST00000440132 TP73-AS1Q9UF72 201 aa11.96□□□□□ -0.49
RNF220-205ENST00000440132 FAT3Q8TDW7 4589 aa11.95□□□□□ -0.5
RNF220-205ENST00000440132 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
RNF220-205ENST00000440132 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
RNF220-205ENST00000440132 LEPROTO15243 131 aa11.93□□□□□ -0.5
RNF220-205ENST00000440132 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
RNF220-205ENST00000440132 SND1-IT1Q9HBX3 110 aa11.93□□□□□ -0.5
RNF220-205ENST00000440132 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
RNF220-205ENST00000440132 HERVK_113P61574 105 aa11.92□□□□□ -0.5
RNF220-205ENST00000440132 HERV-K104P63124 156 aa11.92□□□□□ -0.5
RNF220-205ENST00000440132 PLEKHB2Q96CS7 222 aa11.92□□□□□ -0.5
RNF220-205ENST00000440132 NDUFA12Q9UI09 145 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms