RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 HIST1H2BJP06899 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BOP23527 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BBP33778 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BDP58876 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BCP62807 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST2H2BEQ16778 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BHQ93079 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BNQ99877 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BMQ99879 126 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 C6orf48Q9UBA6 75 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 SPINK8P0C7L1 97 aa12.36□□□□□ -0.43
SEMA3B-206ENST00000439487 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
SEMA3B-206ENST00000439487 C6orf226Q5I0X4 101 aa12.36□□□□□ -0.43
SEMA3B-206ENST00000439487 Q8IZM0 81 aa12.36□□□□□ -0.43
SEMA3B-206ENST00000439487 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
SEMA3B-206ENST00000439487 H3BRM9 83 aa12.34□□□□□ -0.43
SEMA3B-206ENST00000439487 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
SEMA3B-206ENST00000439487 ZNF22P17026 224 aaPredicted RBP12.34□□□□□ -0.43
SEMA3B-206ENST00000439487 PTTG1IPP53801 180 aa12.34□□□□□ -0.43
SEMA3B-206ENST00000439487 TRAV12-1A0A0B4J245 112 aa12.33□□□□□ -0.44
SEMA3B-206ENST00000439487 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
SEMA3B-206ENST00000439487 CKS1BP61024 79 aa12.33□□□□□ -0.44
SEMA3B-206ENST00000439487 RPL18AQ02543 176 aaKnown RBP12.33□□□□□ -0.44
SEMA3B-206ENST00000439487 STPG4Q8N801 248 aa12.33□□□□□ -0.44
SEMA3B-206ENST00000439487 SRRM2Q9UQ35 2752 aaKnown RBP12.32□□□□□ -0.44
SEMA3B-206ENST00000439487 FABP4P15090 132 aa12.32□□□□□ -0.44
SEMA3B-206ENST00000439487 COX7B2Q8TF08 81 aa12.32□□□□□ -0.44
SEMA3B-206ENST00000439487 PLAC8Q9NZF1 115 aa12.32□□□□□ -0.44
SEMA3B-206ENST00000439487 LINC00474Q9P2X8 69 aa12.32□□□□□ -0.44
SEMA3B-206ENST00000439487 TRBV30A0A0K0K1B3 111 aa12.31□□□□□ -0.44
SEMA3B-206ENST00000439487 C9orf116Q5BN46 136 aaPredicted RBP12.31□□□□□ -0.44
SEMA3B-206ENST00000439487 H0Y8G0 127 aa12.3□□□□□ -0.44
SEMA3B-206ENST00000439487 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
SEMA3B-206ENST00000439487 TLX1NBP0CAT3 122 aa12.29□□□□□ -0.44
SEMA3B-206ENST00000439487 Q6ZRP5 223 aa12.29□□□□□ -0.44
SEMA3B-206ENST00000439487 F8VRH5 84 aa12.28□□□□□ -0.44
SEMA3B-206ENST00000439487 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
SEMA3B-206ENST00000439487 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.45
SEMA3B-206ENST00000439487 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-206ENST00000439487 CXCL5P42830 114 aa12.27□□□□□ -0.45
SEMA3B-206ENST00000439487 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
SEMA3B-206ENST00000439487 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.45
SEMA3B-206ENST00000439487 ODF1Q14990 250 aa12.26□□□□□ -0.45
SEMA3B-206ENST00000439487 A0A1W2PNN7 141 aa12.25□□□□□ -0.45
SEMA3B-206ENST00000439487 NDUFC2-KCTD14E9PQ53 114 aa12.24□□□□□ -0.45
SEMA3B-206ENST00000439487 FLG2Q5D862 2391 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-206ENST00000439487 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
SEMA3B-206ENST00000439487 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
SEMA3B-206ENST00000439487 RPL37AP61513 92 aaKnown RBP12.23□□□□□ -0.45
SEMA3B-206ENST00000439487 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-206ENST00000439487 COA6Q5JTJ3 125 aaKnown RBP12.21□□□□□ -0.45
SEMA3B-206ENST00000439487 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
SEMA3B-206ENST00000439487 MAP1LC3CQ9BXW4 147 aa12.21□□□□□ -0.45
SEMA3B-206ENST00000439487 PKHD1L1Q86WI1 4243 aa12.21□□□□□ -0.45
SEMA3B-206ENST00000439487 FAM168BA1KXE4 195 aa12.2□□□□□ -0.46
SEMA3B-206ENST00000439487 C7orf33Q8WU49 177 aa12.2□□□□□ -0.46
SEMA3B-206ENST00000439487 C9orf129Q5T035 196 aaKnown RBP12.19□□□□□ -0.46
SEMA3B-206ENST00000439487 DPM2O94777 84 aa12.17□□□□□ -0.46
SEMA3B-206ENST00000439487 PLNP26678 52 aa12.16□□□□□ -0.46
SEMA3B-206ENST00000439487 PHF5AQ7RTV0 110 aaKnown RBP12.16□□□□□ -0.46
SEMA3B-206ENST00000439487 FAM19A5Q7Z5A7 132 aaPredicted RBP12.16□□□□□ -0.46
SEMA3B-206ENST00000439487 XAGE1AQ9HD64 81 aa12.16□□□□□ -0.46
SEMA3B-206ENST00000439487 SYS1-DBNDD2H3BUS1 97 aa12.15□□□□□ -0.46
SEMA3B-206ENST00000439487 IGKCP01834 107 aa12.15□□□□□ -0.46
SEMA3B-206ENST00000439487 KRTAP7-1Q8IUC3 87 aa12.15□□□□□ -0.46
SEMA3B-206ENST00000439487 ZNF625Q96I27 306 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-206ENST00000439487 PFN2P35080 140 aa12.13□□□□□ -0.47
SEMA3B-206ENST00000439487 ERG28Q9UKR5 140 aa12.12□□□□□ -0.47
SEMA3B-206ENST00000439487 UBR4Q5T4S7 5183 aa12.12□□□□□ -0.47
SEMA3B-206ENST00000439487 MYCBP2O75592 4640 aa12.11□□□□□ -0.47
SEMA3B-206ENST00000439487 C3orf79P0CE67 100 aa12.11□□□□□ -0.47
SEMA3B-206ENST00000439487 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
SEMA3B-206ENST00000439487 SERTAD4-AS1Q5TG53 156 aa12.1□□□□□ -0.47
SEMA3B-206ENST00000439487 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
SEMA3B-206ENST00000439487 PET117Q6UWS5 81 aa12.1□□□□□ -0.47
SEMA3B-206ENST00000439487 M0QXV9 152 aa12.09□□□□□ -0.47
SEMA3B-206ENST00000439487 LEPROTO15243 131 aa12.09□□□□□ -0.47
SEMA3B-206ENST00000439487 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-206ENST00000439487 LINC01545Q5VT33 79 aa12.09□□□□□ -0.47
SEMA3B-206ENST00000439487 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
SEMA3B-206ENST00000439487 KRTDAPP60985 99 aa12.08□□□□□ -0.48
SEMA3B-206ENST00000439487 HERVK_113P61574 105 aa12.08□□□□□ -0.48
SEMA3B-206ENST00000439487 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
SEMA3B-206ENST00000439487 COX17Q14061 63 aa12.07□□□□□ -0.48
SEMA3B-206ENST00000439487 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
SEMA3B-206ENST00000439487 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
SEMA3B-206ENST00000439487 FAT3Q8TDW7 4589 aa12.05□□□□□ -0.48
SEMA3B-206ENST00000439487 A0A0U1RRA0 63 aa12.05□□□□□ -0.48
SEMA3B-206ENST00000439487 LINC00158P58513 81 aa12.05□□□□□ -0.48
SEMA3B-206ENST00000439487 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
SEMA3B-206ENST00000439487 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
SEMA3B-206ENST00000439487 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
SEMA3B-206ENST00000439487 J3QQQ9 107 aa12.04□□□□□ -0.48
SEMA3B-206ENST00000439487 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
SEMA3B-206ENST00000439487 SND1-IT1Q9HBX3 110 aa12.04□□□□□ -0.48
SEMA3B-206ENST00000439487 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
SEMA3B-206ENST00000439487 S100A6P06703 90 aa12.03□□□□□ -0.48
SEMA3B-206ENST00000439487 SMIM13P0DJ93 91 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms