RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
SCLT1-202ENST00000439369 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
SCLT1-202ENST00000439369 IGKV2D-26A0A0A0MRZ7 120 aa8.26□□□□□ -1.09
SCLT1-202ENST00000439369 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
SCLT1-202ENST00000439369 MAJINQ3KP22 176 aa8.26□□□□□ -1.09
SCLT1-202ENST00000439369 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
SCLT1-202ENST00000439369 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
SCLT1-202ENST00000439369 SLPIP03973 132 aa8.25□□□□□ -1.09
SCLT1-202ENST00000439369 S100A12P80511 92 aa8.25□□□□□ -1.09
SCLT1-202ENST00000439369 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
SCLT1-202ENST00000439369 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
SCLT1-202ENST00000439369 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.24□□□□□ -1.09
SCLT1-202ENST00000439369 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
SCLT1-202ENST00000439369 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
SCLT1-202ENST00000439369 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
SCLT1-202ENST00000439369 Q6ZRU5 148 aa8.24□□□□□ -1.09
SCLT1-202ENST00000439369 SACSQ9NZJ4 4579 aa8.24□□□□□ -1.09
SCLT1-202ENST00000439369 COX17Q14061 63 aa8.23□□□□□ -1.09
SCLT1-202ENST00000439369 PAM16Q9Y3D7 125 aa8.23□□□□□ -1.09
SCLT1-202ENST00000439369 IGLV5-52A0A0A0MRZ9 124 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 A0A1B0GVY2 172 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 ZNF815PA8K554 130 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 DLEU1O43261 78 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
SCLT1-202ENST00000439369 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.09
SCLT1-202ENST00000439369 RYR2Q92736 4967 aa8.21□□□□□ -1.09
SCLT1-202ENST00000439369 COX8AP10176 69 aa8.21□□□□□ -1.1
SCLT1-202ENST00000439369 HYDINQ4G0P3 5121 aa8.21□□□□□ -1.1
SCLT1-202ENST00000439369 LOC107984640A0A0U1RRK4 108 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 TIMM17BO60830 172 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 PCP2Q8IVA1 136 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
SCLT1-202ENST00000439369 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
SCLT1-202ENST00000439369 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
SCLT1-202ENST00000439369 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
SCLT1-202ENST00000439369 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
SCLT1-202ENST00000439369 SLC25A34Q6PIV7 304 aa8.18□□□□□ -1.1
SCLT1-202ENST00000439369 SCGB1D4Q6XE38 83 aa8.18□□□□□ -1.1
SCLT1-202ENST00000439369 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
SCLT1-202ENST00000439369 GCSHP23434 173 aa8.17□□□□□ -1.1
SCLT1-202ENST00000439369 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
SCLT1-202ENST00000439369 C12orf57Q99622 126 aa8.17□□□□□ -1.1
SCLT1-202ENST00000439369 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
SCLT1-202ENST00000439369 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
SCLT1-202ENST00000439369 C9orf116Q5BN46 136 aaPredicted RBP8.16□□□□□ -1.1
SCLT1-202ENST00000439369 LINC00518Q8N0U6 118 aa8.16□□□□□ -1.1
SCLT1-202ENST00000439369 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
SCLT1-202ENST00000439369 TMEM238C9JI98 176 aa8.15□□□□□ -1.1
SCLT1-202ENST00000439369 SMIM13P0DJ93 91 aa8.15□□□□□ -1.1
SCLT1-202ENST00000439369 PFN2P35080 140 aa8.15□□□□□ -1.1
SCLT1-202ENST00000439369 LINC00158P58513 81 aa8.15□□□□□ -1.1
SCLT1-202ENST00000439369 Q6ZVH6 145 aa8.15□□□□□ -1.1
SCLT1-202ENST00000439369 DNAH17Q9UFH2 4485 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 Q6ZRP5 223 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 LITAFQ99732 161 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 HIGD1BQ9P298 99 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 DNAH2Q9P225 4427 aa8.14□□□□□ -1.11
SCLT1-202ENST00000439369 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
SCLT1-202ENST00000439369 RPL18AQ02543 176 aaKnown RBP8.13□□□□□ -1.11
SCLT1-202ENST00000439369 COPS9Q8WXC6 57 aa8.13□□□□□ -1.11
SCLT1-202ENST00000439369 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
SCLT1-202ENST00000439369 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-202ENST00000439369 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
SCLT1-202ENST00000439369 A0A096LNI7 61 aa8.12□□□□□ -1.11
SCLT1-202ENST00000439369 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
SCLT1-202ENST00000439369 ARL17AQ8IVW1 177 aa8.12□□□□□ -1.11
SCLT1-202ENST00000439369 MIR7-3HGQ8N6C7 128 aa8.12□□□□□ -1.11
SCLT1-202ENST00000439369 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
SCLT1-202ENST00000439369 IFITM1P13164 125 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCLT1-202ENST00000439369 GAGE2BQ13066 116 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
SCLT1-202ENST00000439369 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 Q6ZSA8 131 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 SPACA4Q8TDM5 124 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 PLA2G2DQ9UNK4 145 aa8.1□□□□□ -1.11
SCLT1-202ENST00000439369 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
SCLT1-202ENST00000439369 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
SCLT1-202ENST00000439369 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
SCLT1-202ENST00000439369 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
SCLT1-202ENST00000439369 SRSF9Q13242 221 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCLT1-202ENST00000439369 TAL2Q16559 108 aa8.08□□□□□ -1.12
SCLT1-202ENST00000439369 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
SCLT1-202ENST00000439369 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
SCLT1-202ENST00000439369 XAGE1AQ9HD64 81 aa8.08□□□□□ -1.12
SCLT1-202ENST00000439369 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
SCLT1-202ENST00000439369 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
SCLT1-202ENST00000439369 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms