RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
SNRPB-202ENST00000438552 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
SNRPB-202ENST00000438552 PRSS2P07478 247 aa10.33□□□□□ -0.76
SNRPB-202ENST00000438552 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
SNRPB-202ENST00000438552 Q8IZM0 81 aa10.33□□□□□ -0.76
SNRPB-202ENST00000438552 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
SNRPB-202ENST00000438552 A0A096LNI7 61 aa10.32□□□□□ -0.76
SNRPB-202ENST00000438552 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
SNRPB-202ENST00000438552 H3BRM9 83 aa10.32□□□□□ -0.76
SNRPB-202ENST00000438552 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
SNRPB-202ENST00000438552 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
SNRPB-202ENST00000438552 F8WDY8 70 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 KRTDAPP60985 99 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 CIRBPQ14011 172 aaKnown RBP10.31□□□□□ -0.76
SNRPB-202ENST00000438552 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
SNRPB-202ENST00000438552 F8VRH5 84 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
SNRPB-202ENST00000438552 AKR1D1P51857 326 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 ODF1Q14990 250 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
SNRPB-202ENST00000438552 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
SNRPB-202ENST00000438552 CKS1BP61024 79 aa10.29□□□□□ -0.76
SNRPB-202ENST00000438552 RPL18AQ02543 176 aaKnown RBP10.29□□□□□ -0.76
SNRPB-202ENST00000438552 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
SNRPB-202ENST00000438552 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
SNRPB-202ENST00000438552 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
SNRPB-202ENST00000438552 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
SNRPB-202ENST00000438552 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 C20orf202A1L168 122 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 GAGE2BQ13066 116 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
SNRPB-202ENST00000438552 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 Q8N1X5 172 aa10.27□□□□□ -0.77
SNRPB-202ENST00000438552 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SNRPB-202ENST00000438552 PTTG1IPP53801 180 aa10.26□□□□□ -0.77
SNRPB-202ENST00000438552 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
SNRPB-202ENST00000438552 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
SNRPB-202ENST00000438552 A0A087WYN8 130 aa10.25□□□□□ -0.77
SNRPB-202ENST00000438552 CXCL5P42830 114 aa10.25□□□□□ -0.77
SNRPB-202ENST00000438552 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
SNRPB-202ENST00000438552 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
SNRPB-202ENST00000438552 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
SNRPB-202ENST00000438552 Q6ZRP5 223 aa10.24□□□□□ -0.77
SNRPB-202ENST00000438552 SCGB1D1O95968 90 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 PLNP26678 52 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 Q5VSD8 79 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 STPG4Q8N801 248 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 KRTAP4-5Q9BYR2 181 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 LINC00474Q9P2X8 69 aa10.23□□□□□ -0.77
SNRPB-202ENST00000438552 DPM2O94777 84 aa10.22□□□□□ -0.77
SNRPB-202ENST00000438552 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
SNRPB-202ENST00000438552 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.77
SNRPB-202ENST00000438552 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
SNRPB-202ENST00000438552 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
SNRPB-202ENST00000438552 EPM2AB3EWF7 344 aa10.2□□□□□ -0.78
SNRPB-202ENST00000438552 IGKCP01834 107 aa10.2□□□□□ -0.78
SNRPB-202ENST00000438552 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
SNRPB-202ENST00000438552 ABCA13Q86UQ4 5058 aa10.19□□□□□ -0.78
SNRPB-202ENST00000438552 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
SNRPB-202ENST00000438552 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
SNRPB-202ENST00000438552 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
SNRPB-202ENST00000438552 C9orf129Q5T035 196 aaKnown RBP10.16□□□□□ -0.78
SNRPB-202ENST00000438552 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
SNRPB-202ENST00000438552 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
SNRPB-202ENST00000438552 PFN2P35080 140 aa10.14□□□□□ -0.79
SNRPB-202ENST00000438552 HERVK_113P61574 105 aa10.14□□□□□ -0.79
SNRPB-202ENST00000438552 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
SNRPB-202ENST00000438552 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
SNRPB-202ENST00000438552 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
SNRPB-202ENST00000438552 LEPROTO15243 131 aa10.13□□□□□ -0.79
SNRPB-202ENST00000438552 PLA2G1BP04054 148 aaKnown RBP10.13□□□□□ -0.79
SNRPB-202ENST00000438552 RPL37AP61513 92 aaKnown RBP10.13□□□□□ -0.79
SNRPB-202ENST00000438552 SFTA2Q6UW10 78 aa10.13□□□□□ -0.79
SNRPB-202ENST00000438552 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
SNRPB-202ENST00000438552 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
SNRPB-202ENST00000438552 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
SNRPB-202ENST00000438552 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
SNRPB-202ENST00000438552 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
SNRPB-202ENST00000438552 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
SNRPB-202ENST00000438552 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
SNRPB-202ENST00000438552 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
SNRPB-202ENST00000438552 C12orf57Q99622 126 aa10.11□□□□□ -0.79
SNRPB-202ENST00000438552 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
SNRPB-202ENST00000438552 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
SNRPB-202ENST00000438552 J3QQQ9 107 aa10.1□□□□□ -0.79
SNRPB-202ENST00000438552 S100A12P80511 92 aa10.1□□□□□ -0.79
SNRPB-202ENST00000438552 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
SNRPB-202ENST00000438552 SERTAD4-AS1Q5TG53 156 aa10.09□□□□□ -0.79
SNRPB-202ENST00000438552 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
SNRPB-202ENST00000438552 E9PLD3 99 aa10.08□□□□□ -0.8
SNRPB-202ENST00000438552 M0QXV9 152 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms