RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
CTSD-205ENST00000438213 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
CTSD-205ENST00000438213 IFI27L1Q96BM0 104 aa10.36□□□□□ -0.75
CTSD-205ENST00000438213 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
CTSD-205ENST00000438213 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
CTSD-205ENST00000438213 TLX1NBP0CAT3 122 aa10.35□□□□□ -0.75
CTSD-205ENST00000438213 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
CTSD-205ENST00000438213 FAM19A2Q8N3H0 131 aa10.35□□□□□ -0.75
CTSD-205ENST00000438213 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
CTSD-205ENST00000438213 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
CTSD-205ENST00000438213 SERF1AO75920 110 aa10.34□□□□□ -0.75
CTSD-205ENST00000438213 CXCL5P42830 114 aa10.34□□□□□ -0.75
CTSD-205ENST00000438213 FAT1Q14517 4588 aa10.34□□□□□ -0.75
CTSD-205ENST00000438213 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
CTSD-205ENST00000438213 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
CTSD-205ENST00000438213 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
CTSD-205ENST00000438213 CHTOPQ9Y3Y2 248 aaKnown RBP10.33□□□□□ -0.76
CTSD-205ENST00000438213 F8VRH5 84 aa10.32□□□□□ -0.76
CTSD-205ENST00000438213 NDUFC2-KCTD14E9PQ53 114 aa10.31□□□□□ -0.76
CTSD-205ENST00000438213 LEPROTL1O95214 131 aa10.31□□□□□ -0.76
CTSD-205ENST00000438213 Q6ZRP5 223 aa10.31□□□□□ -0.76
CTSD-205ENST00000438213 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
CTSD-205ENST00000438213 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
CTSD-205ENST00000438213 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
CTSD-205ENST00000438213 TMEM170BQ5T4T1 132 aa10.3□□□□□ -0.76
CTSD-205ENST00000438213 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
CTSD-205ENST00000438213 C11orf86A6NJI1 115 aa10.29□□□□□ -0.76
CTSD-205ENST00000438213 LINC00310P59036 64 aa10.29□□□□□ -0.76
CTSD-205ENST00000438213 HSPB8Q9UJY1 196 aa10.29□□□□□ -0.76
CTSD-205ENST00000438213 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
CTSD-205ENST00000438213 NUPR1O60356 82 aa10.28□□□□□ -0.76
CTSD-205ENST00000438213 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
CTSD-205ENST00000438213 VPS13BQ7Z7G8 4022 aa10.28□□□□□ -0.76
CTSD-205ENST00000438213 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BKO60814 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BJP06899 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BOP23527 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BBP33778 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BDP58876 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BCP62807 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST2H2BEQ16778 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BHQ93079 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BNQ99877 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 HIST1H2BMQ99879 126 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.77
CTSD-205ENST00000438213 FABP4P15090 132 aa10.26□□□□□ -0.77
CTSD-205ENST00000438213 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
CTSD-205ENST00000438213 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
CTSD-205ENST00000438213 H0Y8G0 127 aa10.24□□□□□ -0.77
CTSD-205ENST00000438213 SFTA2Q6UW10 78 aa10.23□□□□□ -0.77
CTSD-205ENST00000438213 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
CTSD-205ENST00000438213 ODF1Q14990 250 aa10.22□□□□□ -0.77
CTSD-205ENST00000438213 FAM168BA1KXE4 195 aa10.21□□□□□ -0.77
CTSD-205ENST00000438213 C9orf129Q5T035 196 aaKnown RBP10.21□□□□□ -0.77
CTSD-205ENST00000438213 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
CTSD-205ENST00000438213 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.77
CTSD-205ENST00000438213 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
CTSD-205ENST00000438213 XAGE1AQ9HD64 81 aa10.2□□□□□ -0.78
CTSD-205ENST00000438213 PLNP26678 52 aa10.19□□□□□ -0.78
CTSD-205ENST00000438213 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
CTSD-205ENST00000438213 COX17Q14061 63 aa10.18□□□□□ -0.78
CTSD-205ENST00000438213 M0QXV9 152 aa10.17□□□□□ -0.78
CTSD-205ENST00000438213 DPM2O94777 84 aa10.17□□□□□ -0.78
CTSD-205ENST00000438213 PFN2P35080 140 aa10.17□□□□□ -0.78
CTSD-205ENST00000438213 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
CTSD-205ENST00000438213 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
CTSD-205ENST00000438213 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
CTSD-205ENST00000438213 IGKCP01834 107 aa10.15□□□□□ -0.78
CTSD-205ENST00000438213 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
CTSD-205ENST00000438213 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
CTSD-205ENST00000438213 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
CTSD-205ENST00000438213 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
CTSD-205ENST00000438213 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
CTSD-205ENST00000438213 J3QL48 77 aa10.14□□□□□ -0.79
CTSD-205ENST00000438213 OXTP01178 125 aa10.14□□□□□ -0.79
CTSD-205ENST00000438213 HERVK_113P61574 105 aa10.14□□□□□ -0.79
CTSD-205ENST00000438213 UBE2BP63146 152 aa10.14□□□□□ -0.79
CTSD-205ENST00000438213 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
CTSD-205ENST00000438213 SYS1-DBNDD2H3BUS1 97 aa10.13□□□□□ -0.79
CTSD-205ENST00000438213 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
CTSD-205ENST00000438213 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
CTSD-205ENST00000438213 PMCHL2Q9BQD1 86 aa10.13□□□□□ -0.79
CTSD-205ENST00000438213 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
CTSD-205ENST00000438213 LINC00587B1AMM8 73 aa10.12□□□□□ -0.79
CTSD-205ENST00000438213 LEPROTO15243 131 aa10.12□□□□□ -0.79
CTSD-205ENST00000438213 HERV-K104P63124 156 aa10.12□□□□□ -0.79
CTSD-205ENST00000438213 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
CTSD-205ENST00000438213 TP73-AS1Q9UF72 201 aa10.12□□□□□ -0.79
CTSD-205ENST00000438213 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
CTSD-205ENST00000438213 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
CTSD-205ENST00000438213 LINC00158P58513 81 aa10.11□□□□□ -0.79
CTSD-205ENST00000438213 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
CTSD-205ENST00000438213 PET117Q6UWS5 81 aa10.11□□□□□ -0.79
CTSD-205ENST00000438213 NDUFA12Q9UI09 145 aa10.11□□□□□ -0.79
CTSD-205ENST00000438213 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
CTSD-205ENST00000438213 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
CTSD-205ENST00000438213 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
CTSD-205ENST00000438213 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
CTSD-205ENST00000438213 J3QQQ9 107 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms