RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
EXT1-203ENST00000437196 GCSHP23434 173 aa8.76□□□□□ -1.01
EXT1-203ENST00000437196 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
EXT1-203ENST00000437196 LEPROTO15243 131 aa8.75□□□□□ -1.01
EXT1-203ENST00000437196 Q6ZRU5 148 aa8.75□□□□□ -1.01
EXT1-203ENST00000437196 HECTD4Q9Y4D8 3996 aa8.75□□□□□ -1.01
EXT1-203ENST00000437196 HSBP1L1C9JCN9 74 aa8.74□□□□□ -1.01
EXT1-203ENST00000437196 E9PLD3 99 aa8.74□□□□□ -1.01
EXT1-203ENST00000437196 SLPIP03973 132 aa8.74□□□□□ -1.01
EXT1-203ENST00000437196 DNAH11Q96DT5 4516 aa8.74□□□□□ -1.01
EXT1-203ENST00000437196 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
EXT1-203ENST00000437196 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
EXT1-203ENST00000437196 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
EXT1-203ENST00000437196 J3QQQ9 107 aa8.72□□□□□ -1.01
EXT1-203ENST00000437196 NMUP48645 174 aa8.72□□□□□ -1.01
EXT1-203ENST00000437196 HERV-K104P63124 156 aa8.72□□□□□ -1.01
EXT1-203ENST00000437196 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.01
EXT1-203ENST00000437196 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.01
EXT1-203ENST00000437196 LINC00587B1AMM8 73 aa8.71□□□□□ -1.01
EXT1-203ENST00000437196 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.01
EXT1-203ENST00000437196 ATOH7Q8N100 152 aa8.71□□□□□ -1.01
EXT1-203ENST00000437196 STPG4Q8N801 248 aa8.71□□□□□ -1.01
EXT1-203ENST00000437196 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
EXT1-203ENST00000437196 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
EXT1-203ENST00000437196 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
EXT1-203ENST00000437196 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
EXT1-203ENST00000437196 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
EXT1-203ENST00000437196 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
EXT1-203ENST00000437196 FUSP35637 526 aaKnown RBP eCLIP8.7□□□□□ -1.026e-6■■■□□ 19
EXT1-203ENST00000437196 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
EXT1-203ENST00000437196 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
EXT1-203ENST00000437196 COX17Q14061 63 aa8.69□□□□□ -1.02
EXT1-203ENST00000437196 SDIM1Q6ZPB5 146 aa8.69□□□□□ -1.02
EXT1-203ENST00000437196 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
EXT1-203ENST00000437196 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
EXT1-203ENST00000437196 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
EXT1-203ENST00000437196 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
EXT1-203ENST00000437196 MEIG1Q5JSS6 88 aa8.66□□□□□ -1.02
EXT1-203ENST00000437196 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
EXT1-203ENST00000437196 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
EXT1-203ENST00000437196 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
EXT1-203ENST00000437196 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
EXT1-203ENST00000437196 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
EXT1-203ENST00000437196 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 PTTG1IPP53801 180 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 VAMP8Q9BV40 100 aa8.64□□□□□ -1.03
EXT1-203ENST00000437196 EPPK1P58107 5090 aaKnown RBP8.64□□□□□ -1.03
EXT1-203ENST00000437196 PFN2P35080 140 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 PYY3Q5JQD4 70 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 Q6ZRP5 223 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 A0A096LNI7 61 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 IGKV2-24A0A0C4DH68 120 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 LINC00158P58513 81 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 Q6ZSA8 131 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
EXT1-203ENST00000437196 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
EXT1-203ENST00000437196 SPACA4Q8TDM5 124 aa8.62□□□□□ -1.03
EXT1-203ENST00000437196 S100A12P80511 92 aa8.61□□□□□ -1.03
EXT1-203ENST00000437196 PAM16Q9Y3D7 125 aa8.61□□□□□ -1.03
EXT1-203ENST00000437196 LRP1BQ9NZR2 4599 aa8.61□□□□□ -1.03
EXT1-203ENST00000437196 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
EXT1-203ENST00000437196 TIMM17BO60830 172 aa8.6□□□□□ -1.03
EXT1-203ENST00000437196 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
EXT1-203ENST00000437196 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
EXT1-203ENST00000437196 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
EXT1-203ENST00000437196 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
EXT1-203ENST00000437196 PCP2Q8IVA1 136 aa8.59□□□□□ -1.03
EXT1-203ENST00000437196 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
EXT1-203ENST00000437196 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
EXT1-203ENST00000437196 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
EXT1-203ENST00000437196 TTTY13Q9BZ97 58 aa8.58□□□□□ -1.04
EXT1-203ENST00000437196 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
EXT1-203ENST00000437196 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 SMIM6P0DI80 62 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 COX8AP10176 69 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 SND1-IT1Q9HBX3 110 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
EXT1-203ENST00000437196 A0A087WYN8 130 aa8.56□□□□□ -1.04
EXT1-203ENST00000437196 DLEU1O43261 78 aa8.56□□□□□ -1.04
EXT1-203ENST00000437196 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
EXT1-203ENST00000437196 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
EXT1-203ENST00000437196 LOC105371267A0A1B0GV96 52 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 PANO1I0J062 215 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
EXT1-203ENST00000437196 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
EXT1-203ENST00000437196 Q6ZVH6 145 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 DNAH8Q96JB1 4490 aa8.55□□□□□ -1.04
EXT1-203ENST00000437196 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
EXT1-203ENST00000437196 SCXQ7RTU7 201 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms