RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 XGP55808 180 aa9.22□□□□□ -0.93
CSTF3-202ENST00000431742 C10orf25Q5T742 122 aa9.22□□□□□ -0.93
CSTF3-202ENST00000431742 MAP1LC3CQ9BXW4 147 aa9.22□□□□□ -0.93
CSTF3-202ENST00000431742 H0Y8G0 127 aa9.21□□□□□ -0.94
CSTF3-202ENST00000431742 CIRBPQ14011 172 aaKnown RBP9.21□□□□□ -0.94
CSTF3-202ENST00000431742 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
CSTF3-202ENST00000431742 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
CSTF3-202ENST00000431742 UNQ6190/PRO20217Q6UXQ8 127 aa9.21□□□□□ -0.94
CSTF3-202ENST00000431742 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.94
CSTF3-202ENST00000431742 PANO1I0J062 215 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 PRSS2P07478 247 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 COX7B2Q8TF08 81 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 PKIGQ9Y2B9 76 aa9.2□□□□□ -0.94
CSTF3-202ENST00000431742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-202ENST00000431742 SYS1-DBNDD2H3BUS1 97 aa9.19□□□□□ -0.94
CSTF3-202ENST00000431742 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
CSTF3-202ENST00000431742 A0A096LNI7 61 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 TRBV30A0A0K0K1B3 111 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 TMEM223A0PJW6 202 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 PLNP26678 52 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 CXCL5P42830 114 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 HIST3H2BBQ8N257 126 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
CSTF3-202ENST00000431742 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
CSTF3-202ENST00000431742 DPM2O94777 84 aa9.17□□□□□ -0.94
CSTF3-202ENST00000431742 CKS1BP61024 79 aa9.17□□□□□ -0.94
CSTF3-202ENST00000431742 HAMPP81172 84 aa9.17□□□□□ -0.94
CSTF3-202ENST00000431742 PMCHL2Q9BQD1 86 aa9.17□□□□□ -0.94
CSTF3-202ENST00000431742 FAT1Q14517 4588 aa9.16□□□□□ -0.94
CSTF3-202ENST00000431742 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
CSTF3-202ENST00000431742 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
CSTF3-202ENST00000431742 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
CSTF3-202ENST00000431742 PET117Q6UWS5 81 aa9.16□□□□□ -0.94
CSTF3-202ENST00000431742 IGKCP01834 107 aa9.15□□□□□ -0.94
CSTF3-202ENST00000431742 S100A6P06703 90 aa9.15□□□□□ -0.94
CSTF3-202ENST00000431742 PTTG1IPP53801 180 aa9.15□□□□□ -0.94
CSTF3-202ENST00000431742 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
CSTF3-202ENST00000431742 HIST1H2BLQ99880 126 aa9.15□□□□□ -0.94
CSTF3-202ENST00000431742 IGKV2-24A0A0C4DH68 120 aa9.14□□□□□ -0.95
CSTF3-202ENST00000431742 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
CSTF3-202ENST00000431742 KRTDAPP60985 99 aa9.13□□□□□ -0.95
CSTF3-202ENST00000431742 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
CSTF3-202ENST00000431742 Q6ZRP5 223 aa9.13□□□□□ -0.95
CSTF3-202ENST00000431742 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
CSTF3-202ENST00000431742 VPS13BQ7Z7G8 4022 aa9.13□□□□□ -0.95
CSTF3-202ENST00000431742 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
CSTF3-202ENST00000431742 NDUFC2-KCTD14E9PQ53 114 aa9.12□□□□□ -0.95
CSTF3-202ENST00000431742 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
CSTF3-202ENST00000431742 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-202ENST00000431742 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
CSTF3-202ENST00000431742 A0A087WYN8 130 aa9.11□□□□□ -0.95
CSTF3-202ENST00000431742 S100A2P29034 98 aa9.11□□□□□ -0.95
CSTF3-202ENST00000431742 SNRPEP62304 92 aaKnown RBP9.11□□□□□ -0.95
CSTF3-202ENST00000431742 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
CSTF3-202ENST00000431742 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
CSTF3-202ENST00000431742 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
CSTF3-202ENST00000431742 SFTA2Q6UW10 78 aa9.1□□□□□ -0.95
CSTF3-202ENST00000431742 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
CSTF3-202ENST00000431742 Q8N1X5 172 aa9.09□□□□□ -0.95
CSTF3-202ENST00000431742 LEPROTO15243 131 aa9.08□□□□□ -0.96
CSTF3-202ENST00000431742 HERVK_113P61574 105 aa9.08□□□□□ -0.96
CSTF3-202ENST00000431742 STPG4Q8N801 248 aa9.08□□□□□ -0.96
CSTF3-202ENST00000431742 C20orf202A1L168 122 aa9.07□□□□□ -0.96
CSTF3-202ENST00000431742 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-202ENST00000431742 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
CSTF3-202ENST00000431742 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
CSTF3-202ENST00000431742 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
CSTF3-202ENST00000431742 E9PLD3 99 aa9.06□□□□□ -0.96
CSTF3-202ENST00000431742 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
CSTF3-202ENST00000431742 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CSTF3-202ENST00000431742 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
CSTF3-202ENST00000431742 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
CSTF3-202ENST00000431742 J3QQQ9 107 aa9.05□□□□□ -0.96
CSTF3-202ENST00000431742 NDUFA12Q9UI09 145 aa9.05□□□□□ -0.96
CSTF3-202ENST00000431742 AKR1D1P51857 326 aa9.04□□□□□ -0.96
CSTF3-202ENST00000431742 COX17Q14061 63 aa9.04□□□□□ -0.96
CSTF3-202ENST00000431742 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
CSTF3-202ENST00000431742 ABCA13Q86UQ4 5058 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 NMUP48645 174 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 HERV-K104P63124 156 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 Q5VSD8 79 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
CSTF3-202ENST00000431742 SRRM2Q9UQ35 2752 aaKnown RBP9.02□□□□□ -0.96
CSTF3-202ENST00000431742 PKHD1L1Q86WI1 4243 aa9.02□□□□□ -0.96
CSTF3-202ENST00000431742 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
CSTF3-202ENST00000431742 A6NJY4 79 aa9.02□□□□□ -0.97
CSTF3-202ENST00000431742 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
CSTF3-202ENST00000431742 PFN2P35080 140 aa9.02□□□□□ -0.97
CSTF3-202ENST00000431742 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
CSTF3-202ENST00000431742 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
CSTF3-202ENST00000431742 ATOH7Q8N100 152 aa9.01□□□□□ -0.97
CSTF3-202ENST00000431742 FAM229AH3BQW9 127 aa9□□□□□ -0.97
CSTF3-202ENST00000431742 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
CSTF3-202ENST00000431742 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
CSTF3-202ENST00000431742 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 223.1 ms