RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 Q6ZRU5 148 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 PLA2G2DQ9UNK4 145 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 IGLV5-37A0A075B6J1 123 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 SPINK1P00995 79 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 PRLHP81277 87 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 Q96NJ1 140 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
LRRK2-204ENST00000430804 PCDH15Q96QU1 1955 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BKO60814 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BJP06899 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BOP23527 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BBP33778 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BDP58876 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BCP62807 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST2H2BEQ16778 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BHQ93079 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BNQ99877 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 HIST1H2BMQ99879 126 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 A0A1B0GV90 55 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 C8orf87E5RJ46 101 aa3.14□□□□□ -1.91
LRRK2-204ENST00000430804 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 TRBV10-3A0A0K0K1G6 114 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 Q8N814 137 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 MYO9AB2RTY4 2548 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 K7EN84 100 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 TSHBP01222 138 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 ZNF22P17026 224 aaPredicted RBP3.13□□□□□ -1.91
LRRK2-204ENST00000430804 ZNF80P51504 273 aaPredicted RBP3.13□□□□□ -1.91
LRRK2-204ENST00000430804 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 Q8NAQ8 132 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 IGLV7-46A0A075B6I9 117 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 KRTAP10-11P60412 298 aa3.13□□□□□ -1.91
LRRK2-204ENST00000430804 IGKV3D-7A0A0C4DH55 119 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 RNASE3P12724 160 aaKnown RBP3.12□□□□□ -1.91
LRRK2-204ENST00000430804 TEN1Q86WV5 123 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 A0A087WSZ3 146 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 A0A087WYN8 130 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 C9orf118A6NHY6 69 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 CEP192Q8TEP8 1941 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 SERTAD4-AS1Q5TG53 156 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 NDUFC2O95298 119 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 APLNQ9ULZ1 77 aa3.12□□□□□ -1.91
LRRK2-204ENST00000430804 CHTF8P0CG12 524 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
LRRK2-204ENST00000430804 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 LINC01547P58512 204 aaPredicted RBP3.11□□□□□ -1.91
LRRK2-204ENST00000430804 PYY3Q5JQD4 70 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 TP53AIP1Q9HCN2 124 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 ARHGAP21Q5T5U3 1957 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 HIGD1BQ9P298 99 aa3.11□□□□□ -1.91
LRRK2-204ENST00000430804 PTPRSQ13332 1948 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 PRM2P04554 102 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 FAM30AQ9NZY2 134 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 TP73-AS1Q9UF72 201 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 KMT2EQ8IZD2 1858 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 NCOA6Q14686 2063 aaPredicted RBP3.1□□□□□ -1.91
LRRK2-204ENST00000430804 ZNF861PO60384 105 aa3.1□□□□□ -1.91
LRRK2-204ENST00000430804 FLNBO75369 2602 aaKnown RBP3.09□□□□□ -1.91
LRRK2-204ENST00000430804 HEATR5AQ86XA9 2040 aa3.09□□□□□ -1.91
LRRK2-204ENST00000430804 GVQW2A0A096LPI5 108 aaPredicted RBP3.09□□□□□ -1.91
LRRK2-204ENST00000430804 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
LRRK2-204ENST00000430804 MUC22E2RYF6 1773 aaPredicted RBP3.09□□□□□ -1.91
LRRK2-204ENST00000430804 HCG22E2RYF7 251 aa3.09□□□□□ -1.92
LRRK2-204ENST00000430804 SCXQ7RTU7 201 aa3.09□□□□□ -1.92
LRRK2-204ENST00000430804 POLR2KP53803 58 aaKnown RBP3.08□□□□□ -1.92
LRRK2-204ENST00000430804 Q9UF83 564 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 TLN1Q9Y490 2541 aaKnown RBP3.08□□□□□ -1.92
LRRK2-204ENST00000430804 PCNX3Q9H6A9 2034 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 A0A1W2PPM0 123 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 Q5VSD8 79 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 ALPK3Q96L96 1907 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 POLQO75417 2590 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 NDUFC1O43677 76 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 IGLV7-43P04211 117 aa3.08□□□□□ -1.92
LRRK2-204ENST00000430804 LINC00643Q86TS7 51 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 K7EP34 96 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
LRRK2-204ENST00000430804 A0A1B0GW54 56 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 SPTBN4Q9H254 2564 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 NTM-AS1Q6ZSK4 140 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 PRR9Q5T870 116 aa3.07□□□□□ -1.92
LRRK2-204ENST00000430804 SMIM11BQ8TCY0 68 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 DLEU1O43261 78 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 WIPF1O43516 503 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 HRES1P13985 223 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 KIAA1549LQ6ZVL6 1849 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 K7ERJ3 54 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 CXCL6P80162 114 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 TNRC6BQ9UPQ9 1833 aaKnown RBP3.06□□□□□ -1.92
LRRK2-204ENST00000430804 LINC00208Q96KT6 92 aa3.06□□□□□ -1.92
LRRK2-204ENST00000430804 SMIM1B2RUZ4 78 aa3.05□□□□□ -1.92
LRRK2-204ENST00000430804 ADCYAP1P18509 176 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms