RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 F8P00451 2351 aa8.21□□□□□ -1.1
PTCH1-208ENST00000430669 RPL28P46779 137 aaKnown RBP8.21□□□□□ -1.1
PTCH1-208ENST00000430669 FAM240AA0A1B0GVK7 77 aa8.2□□□□□ -1.1
PTCH1-208ENST00000430669 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
PTCH1-208ENST00000430669 H3BNG1 76 aa8.2□□□□□ -1.1
PTCH1-208ENST00000430669 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-208ENST00000430669 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-208ENST00000430669 ZNF706Q9Y5V0 76 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-208ENST00000430669 Q6ZSN1 163 aa8.19□□□□□ -1.1
PTCH1-208ENST00000430669 LINC00694P0DN24 101 aa8.19□□□□□ -1.1
PTCH1-208ENST00000430669 MP68P56378 58 aa8.19□□□□□ -1.1
PTCH1-208ENST00000430669 A8MZ25 164 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 IGKV3D-7A0A0C4DH55 119 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 C6orf99Q4VX62 202 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-208ENST00000430669 LINC00315P59091 139 aa8.18□□□□□ -1.1
PTCH1-208ENST00000430669 DSPP15924 2871 aaKnown RBP8.18□□□□□ -1.1
PTCH1-208ENST00000430669 UPK3BQ9BT76 320 aa8.17□□□□□ -1.1
PTCH1-208ENST00000430669 AKAP13Q12802 2813 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 CASC2Q6XLA1 102 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 CELSR3Q9NYQ7 3312 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
PTCH1-208ENST00000430669 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 BPY2O14599 106 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
PTCH1-208ENST00000430669 A0A096LNT2 108 aa8.15□□□□□ -1.1
PTCH1-208ENST00000430669 C7orf33Q8WU49 177 aa8.15□□□□□ -1.1
PTCH1-208ENST00000430669 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
PTCH1-208ENST00000430669 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.11
PTCH1-208ENST00000430669 HELZ2Q9BYK8 2649 aaKnown RBP8.15□□□□□ -1.11
PTCH1-208ENST00000430669 IGLV5-39A0A0G2JS06 123 aa8.14□□□□□ -1.11
PTCH1-208ENST00000430669 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PTCH1-208ENST00000430669 Q6ZTC4 211 aa8.14□□□□□ -1.11
PTCH1-208ENST00000430669 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
PTCH1-208ENST00000430669 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
PTCH1-208ENST00000430669 A8MTW9 85 aa8.13□□□□□ -1.11
PTCH1-208ENST00000430669 H0Y9J4 135 aa8.13□□□□□ -1.11
PTCH1-208ENST00000430669 K7ERS5 55 aa8.13□□□□□ -1.11
PTCH1-208ENST00000430669 Q8N814 137 aa8.13□□□□□ -1.11
PTCH1-208ENST00000430669 ADAMTSL4-AS1Q5T5F5 129 aa8.12□□□□□ -1.11
PTCH1-208ENST00000430669 UQCRQO14949 82 aa8.11□□□□□ -1.11
PTCH1-208ENST00000430669 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
PTCH1-208ENST00000430669 PRYO14603 147 aa8.11□□□□□ -1.11
PTCH1-208ENST00000430669 SS18L2Q9UHA2 77 aa8.1□□□□□ -1.11
PTCH1-208ENST00000430669 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
PTCH1-208ENST00000430669 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 SLPIP03973 132 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 Q6Q795 121 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 WFDC9Q8NEX5 89 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 RETNQ9HD89 108 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 MT-ATP8P03928 68 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 CCKP06307 115 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 COL6A3P12111 3177 aa8.09□□□□□ -1.11
PTCH1-208ENST00000430669 NDUFC1O43677 76 aa8.08□□□□□ -1.12
PTCH1-208ENST00000430669 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
PTCH1-208ENST00000430669 B5MCH6 92 aa8.08□□□□□ -1.12
PTCH1-208ENST00000430669 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
PTCH1-208ENST00000430669 Q6ZQY7 126 aa8.08□□□□□ -1.12
PTCH1-208ENST00000430669 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-208ENST00000430669 SDIM1Q6ZPB5 146 aa8.07□□□□□ -1.12
PTCH1-208ENST00000430669 IGHV3OR16-9A0A0B4J2B5 98 aa8.07□□□□□ -1.12
PTCH1-208ENST00000430669 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-208ENST00000430669 FRYLO94915 3013 aa8.07□□□□□ -1.12
PTCH1-208ENST00000430669 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
PTCH1-208ENST00000430669 NTM-AS1Q6ZSK4 140 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 J3KT08 172 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 USP17L23D6RBM5 183 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 TRBV7-6A0A0J9YX20 115 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 C10orf25Q5T742 122 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 LY6G6CO95867 125 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 PRB2P02812 416 aaPredicted RBP8.05□□□□□ -1.12
PTCH1-208ENST00000430669 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
PTCH1-208ENST00000430669 Q6JHZ5 121 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
PTCH1-208ENST00000430669 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 C3orf22Q8N5N4 141 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 X6R8D5 127 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 FRYQ5TBA9 3013 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 ENHOQ6UWT2 76 aa8.04□□□□□ -1.12
PTCH1-208ENST00000430669 Q8NAQ8 132 aa8.03□□□□□ -1.12
PTCH1-208ENST00000430669 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-208ENST00000430669 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
PTCH1-208ENST00000430669 CSNK1G2-AS1Q8NCQ2 148 aa8.03□□□□□ -1.12
PTCH1-208ENST00000430669 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
PTCH1-208ENST00000430669 A0A087WYN8 130 aa8.02□□□□□ -1.13
PTCH1-208ENST00000430669 RPL37AP8A6NKH3 93 aa8.01□□□□□ -1.13
PTCH1-208ENST00000430669 EYSQ5T1H1 3165 aa8.01□□□□□ -1.13
PTCH1-208ENST00000430669 SERP2Q8N6R1 65 aa8□□□□□ -1.13
PTCH1-208ENST00000430669 LINC00575Q6W349 94 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 976.2 ms