RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
CSNK1E-207ENST00000430335 LOC107984640A0A0U1RRK4 108 aa12.8□□□□□ -0.36
CSNK1E-207ENST00000430335 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
CSNK1E-207ENST00000430335 TRBV30A0A0K0K1B3 111 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 F8VRH5 84 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 FABP4P15090 132 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 KRTAP17-1Q9BYP8 105 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 LINC00474Q9P2X8 69 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 C6orf48Q9UBA6 75 aa12.79□□□□□ -0.36
CSNK1E-207ENST00000430335 A0A096LNI7 61 aa12.78□□□□□ -0.36
CSNK1E-207ENST00000430335 CXCL5P42830 114 aa12.78□□□□□ -0.36
CSNK1E-207ENST00000430335 CKS1BP61024 79 aa12.78□□□□□ -0.36
CSNK1E-207ENST00000430335 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
CSNK1E-207ENST00000430335 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.37
CSNK1E-207ENST00000430335 IGLV5-39A0A0G2JS06 123 aa12.77□□□□□ -0.37
CSNK1E-207ENST00000430335 TLX1NBP0CAT3 122 aa12.77□□□□□ -0.37
CSNK1E-207ENST00000430335 ODF1Q14990 250 aa12.77□□□□□ -0.37
CSNK1E-207ENST00000430335 COX7B2Q8TF08 81 aa12.77□□□□□ -0.37
CSNK1E-207ENST00000430335 SMR3BP02814 79 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-207ENST00000430335 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
CSNK1E-207ENST00000430335 TMEM170BQ5T4T1 132 aa12.76□□□□□ -0.37
CSNK1E-207ENST00000430335 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
CSNK1E-207ENST00000430335 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
CSNK1E-207ENST00000430335 PLAC8Q9NZF1 115 aa12.75□□□□□ -0.37
CSNK1E-207ENST00000430335 A0A087WYN8 130 aa12.74□□□□□ -0.37
CSNK1E-207ENST00000430335 H0Y8G0 127 aa12.74□□□□□ -0.37
CSNK1E-207ENST00000430335 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
CSNK1E-207ENST00000430335 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
CSNK1E-207ENST00000430335 GAGE2BQ13066 116 aa12.73□□□□□ -0.37
CSNK1E-207ENST00000430335 RPL18AQ02543 176 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-207ENST00000430335 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
CSNK1E-207ENST00000430335 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
CSNK1E-207ENST00000430335 FAM229AH3BQW9 127 aa12.71□□□□□ -0.37
CSNK1E-207ENST00000430335 Q6ZRP5 223 aa12.71□□□□□ -0.37
CSNK1E-207ENST00000430335 STPG4Q8N801 248 aa12.71□□□□□ -0.37
CSNK1E-207ENST00000430335 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
CSNK1E-207ENST00000430335 PLNP26678 52 aa12.7□□□□□ -0.38
CSNK1E-207ENST00000430335 ABCA13Q86UQ4 5058 aa12.69□□□□□ -0.38
CSNK1E-207ENST00000430335 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-207ENST00000430335 Q5VSD8 79 aa12.69□□□□□ -0.38
CSNK1E-207ENST00000430335 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
CSNK1E-207ENST00000430335 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
CSNK1E-207ENST00000430335 KRTAP4-5Q9BYR2 181 aa12.68□□□□□ -0.38
CSNK1E-207ENST00000430335 DPM2O94777 84 aa12.67□□□□□ -0.38
CSNK1E-207ENST00000430335 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
CSNK1E-207ENST00000430335 IGKCP01834 107 aa12.65□□□□□ -0.38
CSNK1E-207ENST00000430335 GAGE2EQ4V326 116 aa12.65□□□□□ -0.38
CSNK1E-207ENST00000430335 PMCHL2Q9BQD1 86 aa12.65□□□□□ -0.38
CSNK1E-207ENST00000430335 GAGE2DQ9UEU5 116 aa12.65□□□□□ -0.38
CSNK1E-207ENST00000430335 PET117Q6UWS5 81 aa12.64□□□□□ -0.39
CSNK1E-207ENST00000430335 A0A1W2PNN7 141 aa12.63□□□□□ -0.39
CSNK1E-207ENST00000430335 PLA2G1BP04054 148 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-207ENST00000430335 C3orf79P0CE67 100 aa12.62□□□□□ -0.39
CSNK1E-207ENST00000430335 LINC01545Q5VT33 79 aa12.62□□□□□ -0.39
CSNK1E-207ENST00000430335 ZNF625Q96I27 306 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-207ENST00000430335 HERVK_113P61574 105 aa12.6□□□□□ -0.39
CSNK1E-207ENST00000430335 C9orf129Q5T035 196 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-207ENST00000430335 S100A6P06703 90 aa12.59□□□□□ -0.39
CSNK1E-207ENST00000430335 HIST3H2BBQ8N257 126 aa12.59□□□□□ -0.39
CSNK1E-207ENST00000430335 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
CSNK1E-207ENST00000430335 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
CSNK1E-207ENST00000430335 KRTDAPP60985 99 aa12.58□□□□□ -0.4
CSNK1E-207ENST00000430335 COX17Q14061 63 aa12.58□□□□□ -0.4
CSNK1E-207ENST00000430335 LEPROTO15243 131 aa12.57□□□□□ -0.4
CSNK1E-207ENST00000430335 KRTAP10-4P60372 401 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-207ENST00000430335 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-207ENST00000430335 PLEKHB2Q96CS7 222 aa12.57□□□□□ -0.4
CSNK1E-207ENST00000430335 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
CSNK1E-207ENST00000430335 FAM168BA1KXE4 195 aa12.56□□□□□ -0.4
CSNK1E-207ENST00000430335 S100A2P29034 98 aa12.55□□□□□ -0.4
CSNK1E-207ENST00000430335 HERV-K104P63124 156 aa12.55□□□□□ -0.4
CSNK1E-207ENST00000430335 HIST1H2BLQ99880 126 aa12.55□□□□□ -0.4
CSNK1E-207ENST00000430335 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
CSNK1E-207ENST00000430335 PFN2P35080 140 aa12.54□□□□□ -0.4
CSNK1E-207ENST00000430335 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
CSNK1E-207ENST00000430335 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
CSNK1E-207ENST00000430335 NDUFA12Q9UI09 145 aa12.54□□□□□ -0.4
CSNK1E-207ENST00000430335 MYMXA0A1B0GTQ4 84 aa12.53□□□□□ -0.4
CSNK1E-207ENST00000430335 C20orf202A1L168 122 aa12.53□□□□□ -0.4
CSNK1E-207ENST00000430335 J3QQQ9 107 aa12.53□□□□□ -0.4
CSNK1E-207ENST00000430335 FAM19A5Q7Z5A7 132 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-207ENST00000430335 SRRM2Q9UQ35 2752 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-207ENST00000430335 E9PLD3 99 aa12.52□□□□□ -0.41
CSNK1E-207ENST00000430335 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 NMUP48645 174 aa12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 AKR1D1P51857 326 aa12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
CSNK1E-207ENST00000430335 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
CSNK1E-207ENST00000430335 LINC00587B1AMM8 73 aa12.5□□□□□ -0.41
CSNK1E-207ENST00000430335 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
CSNK1E-207ENST00000430335 SERTAD4-AS1Q5TG53 156 aa12.5□□□□□ -0.41
CSNK1E-207ENST00000430335 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
CSNK1E-207ENST00000430335 M0QXV9 152 aa12.49□□□□□ -0.41
CSNK1E-207ENST00000430335 LINC00158P58513 81 aa12.48□□□□□ -0.41
CSNK1E-207ENST00000430335 SND1-IT1Q9HBX3 110 aa12.48□□□□□ -0.41
CSNK1E-207ENST00000430335 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms