RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TINCRA0A1B0GVN0 87 aa8.01□□□□□ -1.13
GPC1-204ENST00000426280 SEC11AP67812 179 aa8.01□□□□□ -1.13
GPC1-204ENST00000426280 LEPROTL1O95214 131 aa8□□□□□ -1.13
GPC1-204ENST00000426280 SYCNQ0VAF6 134 aa8□□□□□ -1.13
GPC1-204ENST00000426280 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
GPC1-204ENST00000426280 CARD19Q96LW7 228 aa8□□□□□ -1.13
GPC1-204ENST00000426280 H0Y8G0 127 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 J3QL48 77 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 KIAA0087Q14695 138 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 STPG4Q8N801 248 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 OR10D4PQ8NGN7 298 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
GPC1-204ENST00000426280 IGLV5-45A0A087WSX0 123 aa7.98□□□□□ -1.13
GPC1-204ENST00000426280 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
GPC1-204ENST00000426280 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
GPC1-204ENST00000426280 ZNF22P17026 224 aaPredicted RBP7.98□□□□□ -1.13
GPC1-204ENST00000426280 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
GPC1-204ENST00000426280 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
GPC1-204ENST00000426280 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
GPC1-204ENST00000426280 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
GPC1-204ENST00000426280 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
GPC1-204ENST00000426280 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
GPC1-204ENST00000426280 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
GPC1-204ENST00000426280 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
GPC1-204ENST00000426280 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
GPC1-204ENST00000426280 PACRGQ96M98 296 aaPredicted RBP7.97□□□□□ -1.13
GPC1-204ENST00000426280 MRPL35Q9NZE8 188 aaKnown RBP7.97□□□□□ -1.13
GPC1-204ENST00000426280 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
GPC1-204ENST00000426280 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
GPC1-204ENST00000426280 HSPB8Q9UJY1 196 aa7.96□□□□□ -1.14
GPC1-204ENST00000426280 DMBT1Q9UGM3 2413 aaPredicted RBP7.95□□□□□ -1.14
GPC1-204ENST00000426280 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
GPC1-204ENST00000426280 ODF1Q14990 250 aa7.95□□□□□ -1.14
GPC1-204ENST00000426280 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
GPC1-204ENST00000426280 F8VRH5 84 aa7.94□□□□□ -1.14
GPC1-204ENST00000426280 NDUFA1O15239 70 aa7.94□□□□□ -1.14
GPC1-204ENST00000426280 PRSS2P07478 247 aa7.94□□□□□ -1.14
GPC1-204ENST00000426280 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
GPC1-204ENST00000426280 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
GPC1-204ENST00000426280 H3BRM9 83 aa7.93□□□□□ -1.14
GPC1-204ENST00000426280 OXTP01178 125 aa7.93□□□□□ -1.14
GPC1-204ENST00000426280 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
GPC1-204ENST00000426280 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
GPC1-204ENST00000426280 Q8IZM0 81 aa7.93□□□□□ -1.14
GPC1-204ENST00000426280 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
GPC1-204ENST00000426280 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
GPC1-204ENST00000426280 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
GPC1-204ENST00000426280 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
GPC1-204ENST00000426280 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
GPC1-204ENST00000426280 F8WDY8 70 aa7.91□□□□□ -1.14
GPC1-204ENST00000426280 CKS1BP61024 79 aa7.91□□□□□ -1.14
GPC1-204ENST00000426280 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
GPC1-204ENST00000426280 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
GPC1-204ENST00000426280 TMEM223A0PJW6 202 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 SYS1-DBNDD2H3BUS1 97 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 RNF151Q2KHN1 245 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 PKIGQ9Y2B9 76 aa7.9□□□□□ -1.14
GPC1-204ENST00000426280 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
GPC1-204ENST00000426280 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
GPC1-204ENST00000426280 Q6ZRP5 223 aa7.89□□□□□ -1.15
GPC1-204ENST00000426280 PHF5AQ7RTV0 110 aaKnown RBP7.89□□□□□ -1.15
GPC1-204ENST00000426280 C7orf33Q8WU49 177 aa7.89□□□□□ -1.15
GPC1-204ENST00000426280 TRBV30A0A0K0K1B3 111 aa7.88□□□□□ -1.15
GPC1-204ENST00000426280 DPM2O94777 84 aa7.88□□□□□ -1.15
GPC1-204ENST00000426280 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
GPC1-204ENST00000426280 LINC00474Q9P2X8 69 aa7.88□□□□□ -1.15
GPC1-204ENST00000426280 IGKCP01834 107 aa7.87□□□□□ -1.15
GPC1-204ENST00000426280 KRTDAPP60985 99 aa7.87□□□□□ -1.15
GPC1-204ENST00000426280 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
GPC1-204ENST00000426280 S100A6P06703 90 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 PLNP26678 52 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 CXCL5P42830 114 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
GPC1-204ENST00000426280 SNRPEP62304 92 aaKnown RBP7.85□□□□□ -1.15
GPC1-204ENST00000426280 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
GPC1-204ENST00000426280 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
GPC1-204ENST00000426280 ZNF625Q96I27 306 aaPredicted RBP7.85□□□□□ -1.15
GPC1-204ENST00000426280 NDUFC2-KCTD14E9PQ53 114 aa7.84□□□□□ -1.15
GPC1-204ENST00000426280 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
GPC1-204ENST00000426280 HIST1H2BLQ99880 126 aa7.84□□□□□ -1.15
GPC1-204ENST00000426280 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
GPC1-204ENST00000426280 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
GPC1-204ENST00000426280 S100A2P29034 98 aa7.83□□□□□ -1.16
GPC1-204ENST00000426280 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
GPC1-204ENST00000426280 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
GPC1-204ENST00000426280 C5orf52A6NGY3 159 aa7.81□□□□□ -1.16
GPC1-204ENST00000426280 LEPROTO15243 131 aa7.81□□□□□ -1.16
GPC1-204ENST00000426280 PFN2P35080 140 aa7.81□□□□□ -1.16
GPC1-204ENST00000426280 FAM19A5Q7Z5A7 132 aaPredicted RBP7.81□□□□□ -1.16
GPC1-204ENST00000426280 HERVK_113P61574 105 aa7.8□□□□□ -1.16
GPC1-204ENST00000426280 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
GPC1-204ENST00000426280 ATOH7Q8N100 152 aa7.8□□□□□ -1.16
GPC1-204ENST00000426280 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
GPC1-204ENST00000426280 ERG28Q9UKR5 140 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms