RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 LEPROTL1O95214 131 aa8.7□□□□□ -1.02
SNX3-204ENST00000426155 C5orf38Q86SI9 138 aa8.7□□□□□ -1.02
SNX3-204ENST00000426155 Q8N8P6 123 aa8.7□□□□□ -1.02
SNX3-204ENST00000426155 COX7A2LO14548 114 aa8.69□□□□□ -1.02
SNX3-204ENST00000426155 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
SNX3-204ENST00000426155 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
SNX3-204ENST00000426155 COX6A2Q02221 97 aa8.69□□□□□ -1.02
SNX3-204ENST00000426155 SLC25A34Q6PIV7 304 aa8.69□□□□□ -1.02
SNX3-204ENST00000426155 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
SNX3-204ENST00000426155 IGLV4-3A0A075B6K6 122 aa8.68□□□□□ -1.02
SNX3-204ENST00000426155 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
SNX3-204ENST00000426155 MALP21145 153 aa8.68□□□□□ -1.02
SNX3-204ENST00000426155 IFI27P40305 119 aaPredicted RBP8.68□□□□□ -1.02
SNX3-204ENST00000426155 MRPS36P82909 103 aaKnown RBP8.68□□□□□ -1.02
SNX3-204ENST00000426155 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
SNX3-204ENST00000426155 ZC2HC1BQ5TFG8 222 aa8.68□□□□□ -1.02
SNX3-204ENST00000426155 IGLV4-69A0A075B6H9 119 aa8.67□□□□□ -1.02
SNX3-204ENST00000426155 IGKV2-24A0A0C4DH68 120 aa8.67□□□□□ -1.02
SNX3-204ENST00000426155 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
SNX3-204ENST00000426155 C2orf66Q6UXQ4 117 aa8.67□□□□□ -1.02
SNX3-204ENST00000426155 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
SNX3-204ENST00000426155 A0A096LNI7 61 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
SNX3-204ENST00000426155 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 PCP4P48539 62 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 VAMP3Q15836 100 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 KRTAP9-2Q9BYQ4 174 aa8.66□□□□□ -1.02
SNX3-204ENST00000426155 HERC1Q15751 4861 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 A0A087WYN8 130 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 ORMDL2Q53FV1 153 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 CYSLTR1Q9Y271 337 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.02
SNX3-204ENST00000426155 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 SPAG11BQ08648 103 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 SYCNQ0VAF6 134 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 Q6ZRU5 148 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
SNX3-204ENST00000426155 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
SNX3-204ENST00000426155 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SNX3-204ENST00000426155 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
SNX3-204ENST00000426155 SEC11AP67812 179 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 MAJINQ3KP22 176 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
SNX3-204ENST00000426155 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
SNX3-204ENST00000426155 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
SNX3-204ENST00000426155 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 IGIPA6NJ69 53 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 K7EMI3 77 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 APOMO95445 188 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 UBE2D1P51668 147 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
SNX3-204ENST00000426155 A0A0J9YXV3 536 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 A6NDN8 102 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 COX8AP10176 69 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 GTF2H5Q6ZYL4 71 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 AMELXQ99217 191 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 PLAC8Q9NZF1 115 aa8.6□□□□□ -1.03
SNX3-204ENST00000426155 K7ERU9 68 aa8.59□□□□□ -1.03
SNX3-204ENST00000426155 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
SNX3-204ENST00000426155 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SNX3-204ENST00000426155 A0A087WZ39 114 aa8.58□□□□□ -1.04
SNX3-204ENST00000426155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.58□□□□□ -1.04
SNX3-204ENST00000426155 TAX1BP3O14907 124 aa8.58□□□□□ -1.04
SNX3-204ENST00000426155 GAGE2BQ13066 116 aa8.58□□□□□ -1.04
SNX3-204ENST00000426155 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
SNX3-204ENST00000426155 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
SNX3-204ENST00000426155 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
SNX3-204ENST00000426155 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
SNX3-204ENST00000426155 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
SNX3-204ENST00000426155 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
SNX3-204ENST00000426155 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
SNX3-204ENST00000426155 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
SNX3-204ENST00000426155 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
SNX3-204ENST00000426155 H3BRM9 83 aa8.55□□□□□ -1.04
SNX3-204ENST00000426155 HSD52Q0P140 79 aa8.55□□□□□ -1.04
SNX3-204ENST00000426155 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
SNX3-204ENST00000426155 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
SNX3-204ENST00000426155 C6orf48Q9UBA6 75 aa8.55□□□□□ -1.04
SNX3-204ENST00000426155 NDUFA1O15239 70 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 GHRHP01286 108 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 ERASQ7Z444 233 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
SNX3-204ENST00000426155 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
SNX3-204ENST00000426155 A0A096LNJ9 63 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 HBDP02042 147 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 OCIAD2Q56VL3 154 aa8.53□□□□□ -1.04
SNX3-204ENST00000426155 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms