RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PANO1I0J062 215 aa15.66■□□□□ 0.1
VEGFA-209ENST00000425836 COX7B2Q8TF08 81 aa15.65■□□□□ 0.1
VEGFA-209ENST00000425836 C6orf48Q9UBA6 75 aa15.65■□□□□ 0.1
VEGFA-209ENST00000425836 IGLV5-39A0A0G2JS06 123 aa15.64■□□□□ 0.09
VEGFA-209ENST00000425836 CKS1BP61024 79 aa15.64■□□□□ 0.09
VEGFA-209ENST00000425836 CHTF8P0CG12 524 aa15.63■□□□□ 0.09
VEGFA-209ENST00000425836 CIRBPQ14011 172 aaKnown RBP15.62■□□□□ 0.09
VEGFA-209ENST00000425836 HERC2O95714 4834 aa15.62■□□□□ 0.09
VEGFA-209ENST00000425836 SYS1-DBNDD2H3BUS1 97 aa15.62■□□□□ 0.09
VEGFA-209ENST00000425836 SCXQ7RTU7 201 aa15.62■□□□□ 0.09
VEGFA-209ENST00000425836 PMCHL2Q9BQD1 86 aa15.62■□□□□ 0.09
VEGFA-209ENST00000425836 PKIGQ9Y2B9 76 aa15.62■□□□□ 0.09
VEGFA-209ENST00000425836 A0A096LNI7 61 aa15.61■□□□□ 0.09
VEGFA-209ENST00000425836 TRBV30A0A0K0K1B3 111 aa15.61■□□□□ 0.09
VEGFA-209ENST00000425836 LOC107984640A0A0U1RRK4 108 aa15.61■□□□□ 0.09
VEGFA-209ENST00000425836 IGKV2-24A0A0C4DH68 120 aa15.6■□□□□ 0.09
VEGFA-209ENST00000425836 TMEM223A0PJW6 202 aa15.6■□□□□ 0.09
VEGFA-209ENST00000425836 CXCL5P42830 114 aa15.6■□□□□ 0.09
VEGFA-209ENST00000425836 CIRBP-AS1Q8TBR5 109 aa15.6■□□□□ 0.09
VEGFA-209ENST00000425836 SPACA4Q8TDM5 124 aa15.6■□□□□ 0.09
VEGFA-209ENST00000425836 TMA7Q9Y2S6 64 aaKnown RBP15.6■□□□□ 0.09
VEGFA-209ENST00000425836 PLNP26678 52 aa15.59■□□□□ 0.09
VEGFA-209ENST00000425836 DPM2O94777 84 aa15.58■□□□□ 0.09
VEGFA-209ENST00000425836 S100A6P06703 90 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 C3orf79P0CE67 100 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 PTTG1IPP53801 180 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 GAGE2BQ13066 116 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 C9orf116Q5BN46 136 aaPredicted RBP15.57■□□□□ 0.08
VEGFA-209ENST00000425836 HIST3H2BBQ8N257 126 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 DPH3Q96FX2 82 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 KRTAP17-1Q9BYP8 105 aa15.57■□□□□ 0.08
VEGFA-209ENST00000425836 TLX1NBP0CAT3 122 aa15.56■□□□□ 0.08
VEGFA-209ENST00000425836 RPL18AQ02543 176 aaKnown RBP15.56■□□□□ 0.08
VEGFA-209ENST00000425836 MAJINQ3KP22 176 aa15.56■□□□□ 0.08
VEGFA-209ENST00000425836 PET117Q6UWS5 81 aa15.56■□□□□ 0.08
VEGFA-209ENST00000425836 IGKCP01834 107 aa15.55■□□□□ 0.08
VEGFA-209ENST00000425836 LINC01545Q5VT33 79 aa15.54■□□□□ 0.08
VEGFA-209ENST00000425836 LINC00474Q9P2X8 69 aa15.54■□□□□ 0.08
VEGFA-209ENST00000425836 A0A087WYN8 130 aa15.53■□□□□ 0.08
VEGFA-209ENST00000425836 SMR3BP02814 79 aaPredicted RBP15.53■□□□□ 0.08
VEGFA-209ENST00000425836 KRTDAPP60985 99 aa15.53■□□□□ 0.08
VEGFA-209ENST00000425836 Q6ZRP5 223 aa15.53■□□□□ 0.08
VEGFA-209ENST00000425836 NDUFC2-KCTD14E9PQ53 114 aa15.51■□□□□ 0.07
VEGFA-209ENST00000425836 S100A2P29034 98 aa15.51■□□□□ 0.07
VEGFA-209ENST00000425836 HIST1H2BLQ99880 126 aa15.51■□□□□ 0.07
VEGFA-209ENST00000425836 FAT1Q14517 4588 aa15.51■□□□□ 0.07
VEGFA-209ENST00000425836 SNRPEP62304 92 aaKnown RBP15.5■□□□□ 0.07
VEGFA-209ENST00000425836 PLAC8Q9NZF1 115 aa15.5■□□□□ 0.07
VEGFA-209ENST00000425836 Q8N1X5 172 aa15.49■□□□□ 0.07
VEGFA-209ENST00000425836 STPG4Q8N801 248 aa15.49■□□□□ 0.07
VEGFA-209ENST00000425836 GAGE2EQ4V326 116 aa15.49■□□□□ 0.07
VEGFA-209ENST00000425836 GAGE2DQ9UEU5 116 aa15.49■□□□□ 0.07
VEGFA-209ENST00000425836 C5orf52A6NGY3 159 aa15.47■□□□□ 0.07
VEGFA-209ENST00000425836 ZNF625Q96I27 306 aaPredicted RBP15.47■□□□□ 0.07
VEGFA-209ENST00000425836 HERVK_113P61574 105 aa15.45■□□□□ 0.06
VEGFA-209ENST00000425836 SFTA2Q6UW10 78 aa15.45■□□□□ 0.06
VEGFA-209ENST00000425836 A0A1W2PNN7 141 aa15.44■□□□□ 0.06
VEGFA-209ENST00000425836 LEPROTO15243 131 aa15.44■□□□□ 0.06
VEGFA-209ENST00000425836 C20orf202A1L168 122 aa15.42■□□□□ 0.06
VEGFA-209ENST00000425836 TSPEAR-AS2P59090 65 aa15.42■□□□□ 0.06
VEGFA-209ENST00000425836 LINC00528Q8N1L1 170 aa15.42■□□□□ 0.06
VEGFA-209ENST00000425836 PLEKHB2Q96CS7 222 aa15.42■□□□□ 0.06
VEGFA-209ENST00000425836 EPM2AB3EWF7 344 aa15.41■□□□□ 0.06
VEGFA-209ENST00000425836 C9orf129Q5T035 196 aaKnown RBP15.41■□□□□ 0.06
VEGFA-209ENST00000425836 NDUFA12Q9UI09 145 aa15.41■□□□□ 0.06
VEGFA-209ENST00000425836 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
VEGFA-209ENST00000425836 PFN2P35080 140 aa15.4■□□□□ 0.06
VEGFA-209ENST00000425836 E9PLD3 99 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 FAM229AH3BQW9 127 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 J3QQQ9 107 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 Q5VSD8 79 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 KRTAP4-5Q9BYR2 181 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 XAGE1AQ9HD64 81 aa15.39■□□□□ 0.05
VEGFA-209ENST00000425836 FAM168BA1KXE4 195 aa15.38■□□□□ 0.05
VEGFA-209ENST00000425836 COX17Q14061 63 aa15.36■□□□□ 0.05
VEGFA-209ENST00000425836 MYMXA0A1B0GTQ4 84 aa15.36■□□□□ 0.05
VEGFA-209ENST00000425836 HERV-K104P63124 156 aa15.36■□□□□ 0.05
VEGFA-209ENST00000425836 KRTAP7-1Q8IUC3 87 aa15.36■□□□□ 0.05
VEGFA-209ENST00000425836 LGALS3P17931 250 aaKnown RBP15.35■□□□□ 0.05
VEGFA-209ENST00000425836 ATOH7Q8N100 152 aa15.34■□□□□ 0.05
VEGFA-209ENST00000425836 FAM19A5Q7Z5A7 132 aaPredicted RBP15.33■□□□□ 0.05
VEGFA-209ENST00000425836 NMUP48645 174 aa15.32■□□□□ 0.04
VEGFA-209ENST00000425836 AKR1D1P51857 326 aa15.32■□□□□ 0.04
VEGFA-209ENST00000425836 LINC00158P58513 81 aa15.32■□□□□ 0.04
VEGFA-209ENST00000425836 C7orf33Q8WU49 177 aa15.31■□□□□ 0.04
VEGFA-209ENST00000425836 IGKV2D-26A0A0A0MRZ7 120 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 A0A0U1RRA0 63 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 SMIM13P0DJ93 91 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 MEIG1Q5JSS6 88 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 SERTAD4-AS1Q5TG53 156 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 SND1-IT1Q9HBX3 110 aa15.3■□□□□ 0.04
VEGFA-209ENST00000425836 PLA2G1BP04054 148 aaKnown RBP15.29■□□□□ 0.04
VEGFA-209ENST00000425836 PHF5AQ7RTV0 110 aaKnown RBP15.29■□□□□ 0.04
VEGFA-209ENST00000425836 LINC00587B1AMM8 73 aa15.28■□□□□ 0.04
VEGFA-209ENST00000425836 KRTAP10-4P60372 401 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-209ENST00000425836 RPL37AP61513 92 aaKnown RBP15.28■□□□□ 0.04
VEGFA-209ENST00000425836 ANKRD39Q53RE8 183 aa15.27■□□□□ 0.03
VEGFA-209ENST00000425836 PLA2G2DQ9UNK4 145 aa15.26■□□□□ 0.03
VEGFA-209ENST00000425836 M0QXV9 152 aa15.25■□□□□ 0.03
VEGFA-209ENST00000425836 VPS13BQ7Z7G8 4022 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms