RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 COX7B2Q8TF08 81 aa14.05□□□□□ -0.16
HMGA2-205ENST00000425208 CXCL5P42830 114 aa14.04□□□□□ -0.16
HMGA2-205ENST00000425208 C10orf25Q5T742 122 aa14.04□□□□□ -0.16
HMGA2-205ENST00000425208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.04□□□□□ -0.16
HMGA2-205ENST00000425208 LOC107984640A0A0U1RRK4 108 aa14.03□□□□□ -0.16
HMGA2-205ENST00000425208 TRBV30A0A0K0K1B3 111 aa14.02□□□□□ -0.16
HMGA2-205ENST00000425208 SCXQ7RTU7 201 aa14.02□□□□□ -0.16
HMGA2-205ENST00000425208 C6orf48Q9UBA6 75 aa14.02□□□□□ -0.16
HMGA2-205ENST00000425208 IGKV2-24A0A0C4DH68 120 aa14.01□□□□□ -0.17
HMGA2-205ENST00000425208 IGLV5-39A0A0G2JS06 123 aa14.01□□□□□ -0.17
HMGA2-205ENST00000425208 CHTF8P0CG12 524 aa14.01□□□□□ -0.17
HMGA2-205ENST00000425208 CIRBPQ14011 172 aaKnown RBP14.01□□□□□ -0.17
HMGA2-205ENST00000425208 A0A096LNI7 61 aa14□□□□□ -0.17
HMGA2-205ENST00000425208 PANO1I0J062 215 aa14□□□□□ -0.17
HMGA2-205ENST00000425208 PLNP26678 52 aa14□□□□□ -0.17
HMGA2-205ENST00000425208 SPACA4Q8TDM5 124 aa14□□□□□ -0.17
HMGA2-205ENST00000425208 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
HMGA2-205ENST00000425208 CIRBP-AS1Q8TBR5 109 aa13.99□□□□□ -0.17
HMGA2-205ENST00000425208 LINC00474Q9P2X8 69 aa13.99□□□□□ -0.17
HMGA2-205ENST00000425208 SYS1-DBNDD2H3BUS1 97 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 DPM2O94777 84 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 S100A6P06703 90 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 DPH3Q96FX2 82 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 TMEM223A0PJW6 202 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 PMCHL2Q9BQD1 86 aa13.98□□□□□ -0.17
HMGA2-205ENST00000425208 PTTG1IPP53801 180 aa13.97□□□□□ -0.17
HMGA2-205ENST00000425208 GAGE2BQ13066 116 aa13.97□□□□□ -0.17
HMGA2-205ENST00000425208 MAJINQ3KP22 176 aa13.97□□□□□ -0.17
HMGA2-205ENST00000425208 IGKCP01834 107 aa13.96□□□□□ -0.18
HMGA2-205ENST00000425208 TLX1NBP0CAT3 122 aa13.96□□□□□ -0.18
HMGA2-205ENST00000425208 HERC2O95714 4834 aa13.95□□□□□ -0.18
HMGA2-205ENST00000425208 C9orf116Q5BN46 136 aaPredicted RBP13.94□□□□□ -0.18
HMGA2-205ENST00000425208 PET117Q6UWS5 81 aa13.94□□□□□ -0.18
HMGA2-205ENST00000425208 A0A087WYN8 130 aa13.93□□□□□ -0.18
HMGA2-205ENST00000425208 NDUFC2-KCTD14E9PQ53 114 aa13.93□□□□□ -0.18
HMGA2-205ENST00000425208 C3orf79P0CE67 100 aa13.93□□□□□ -0.18
HMGA2-205ENST00000425208 S100A2P29034 98 aa13.93□□□□□ -0.18
HMGA2-205ENST00000425208 SMR3BP02814 79 aaPredicted RBP13.92□□□□□ -0.18
HMGA2-205ENST00000425208 KRTDAPP60985 99 aa13.92□□□□□ -0.18
HMGA2-205ENST00000425208 Q6ZRP5 223 aa13.92□□□□□ -0.18
HMGA2-205ENST00000425208 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
HMGA2-205ENST00000425208 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
HMGA2-205ENST00000425208 SFTA2Q6UW10 78 aa13.91□□□□□ -0.18
HMGA2-205ENST00000425208 Q8N1X5 172 aa13.91□□□□□ -0.18
HMGA2-205ENST00000425208 STPG4Q8N801 248 aa13.91□□□□□ -0.18
HMGA2-205ENST00000425208 PLAC8Q9NZF1 115 aa13.9□□□□□ -0.18
HMGA2-205ENST00000425208 HERVK_113P61574 105 aa13.9□□□□□ -0.19
HMGA2-205ENST00000425208 GAGE2EQ4V326 116 aa13.9□□□□□ -0.19
HMGA2-205ENST00000425208 GAGE2DQ9UEU5 116 aa13.9□□□□□ -0.19
HMGA2-205ENST00000425208 HIST1H2BLQ99880 126 aa13.88□□□□□ -0.19
HMGA2-205ENST00000425208 C20orf202A1L168 122 aa13.87□□□□□ -0.19
HMGA2-205ENST00000425208 SNRPEP62304 92 aaKnown RBP13.87□□□□□ -0.19
HMGA2-205ENST00000425208 FAT1Q14517 4588 aa13.87□□□□□ -0.19
HMGA2-205ENST00000425208 LINC00528Q8N1L1 170 aa13.86□□□□□ -0.19
HMGA2-205ENST00000425208 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
HMGA2-205ENST00000425208 KRTAP17-1Q9BYP8 105 aa13.85□□□□□ -0.19
HMGA2-205ENST00000425208 EPM2AB3EWF7 344 aa13.84□□□□□ -0.19
HMGA2-205ENST00000425208 FAM229AH3BQW9 127 aa13.84□□□□□ -0.19
HMGA2-205ENST00000425208 LEPROTO15243 131 aa13.84□□□□□ -0.19
HMGA2-205ENST00000425208 PLEKHB2Q96CS7 222 aa13.84□□□□□ -0.19
HMGA2-205ENST00000425208 Q5VSD8 79 aa13.83□□□□□ -0.2
HMGA2-205ENST00000425208 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
HMGA2-205ENST00000425208 ERG28Q9UKR5 140 aa13.82□□□□□ -0.2
HMGA2-205ENST00000425208 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 A0A1W2PNN7 141 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 J3QQQ9 107 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 PFN2P35080 140 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 TSPEAR-AS2P59090 65 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 COX17Q14061 63 aa13.81□□□□□ -0.2
HMGA2-205ENST00000425208 C9orf129Q5T035 196 aaKnown RBP13.81□□□□□ -0.2
HMGA2-205ENST00000425208 E9PLD3 99 aa13.8□□□□□ -0.2
HMGA2-205ENST00000425208 AKR1D1P51857 326 aa13.8□□□□□ -0.2
HMGA2-205ENST00000425208 HERV-K104P63124 156 aa13.8□□□□□ -0.2
HMGA2-205ENST00000425208 XAGE1AQ9HD64 81 aa13.8□□□□□ -0.2
HMGA2-205ENST00000425208 MYMXA0A1B0GTQ4 84 aa13.79□□□□□ -0.2
HMGA2-205ENST00000425208 LGALS3P17931 250 aaKnown RBP13.79□□□□□ -0.2
HMGA2-205ENST00000425208 C7orf33Q8WU49 177 aa13.79□□□□□ -0.2
HMGA2-205ENST00000425208 FAM168BA1KXE4 195 aa13.78□□□□□ -0.2
HMGA2-205ENST00000425208 PLA2G1BP04054 148 aaKnown RBP13.77□□□□□ -0.21
HMGA2-205ENST00000425208 NMUP48645 174 aa13.77□□□□□ -0.21
HMGA2-205ENST00000425208 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
HMGA2-205ENST00000425208 VPS13BQ7Z7G8 4022 aa13.75□□□□□ -0.21
HMGA2-205ENST00000425208 MEIG1Q5JSS6 88 aa13.75□□□□□ -0.21
HMGA2-205ENST00000425208 KRTAP4-5Q9BYR2 181 aa13.74□□□□□ -0.21
HMGA2-205ENST00000425208 LINC00587B1AMM8 73 aa13.73□□□□□ -0.21
HMGA2-205ENST00000425208 LINC00158P58513 81 aa13.73□□□□□ -0.21
HMGA2-205ENST00000425208 RPL37AP61513 92 aaKnown RBP13.73□□□□□ -0.21
HMGA2-205ENST00000425208 ATOH7Q8N100 152 aa13.73□□□□□ -0.21
HMGA2-205ENST00000425208 A0A0U1RRA0 63 aa13.72□□□□□ -0.21
HMGA2-205ENST00000425208 M0QXV9 152 aa13.72□□□□□ -0.21
HMGA2-205ENST00000425208 SMIM13P0DJ93 91 aa13.72□□□□□ -0.21
HMGA2-205ENST00000425208 SND1-IT1Q9HBX3 110 aa13.72□□□□□ -0.21
HMGA2-205ENST00000425208 PHF5AQ7RTV0 110 aaKnown RBP13.71□□□□□ -0.22
HMGA2-205ENST00000425208 KRTAP7-1Q8IUC3 87 aa13.71□□□□□ -0.22
HMGA2-205ENST00000425208 SERTAD4-AS1Q5TG53 156 aa13.7□□□□□ -0.22
HMGA2-205ENST00000425208 TMA7Q9Y2S6 64 aaKnown RBP13.69□□□□□ -0.22
HMGA2-205ENST00000425208 IGKV2D-26A0A0A0MRZ7 120 aa13.68□□□□□ -0.22
HMGA2-205ENST00000425208 PLA2G2DQ9UNK4 145 aa13.68□□□□□ -0.22
HMGA2-205ENST00000425208 PCLOQ9Y6V0 5065 aa13.67□□□□□ -0.22
HMGA2-205ENST00000425208 MIR7-3HGQ8N6C7 128 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms