RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 GCSHP23434 173 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 HERVK_113P61574 105 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 SYCNQ0VAF6 134 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 KIAA0087Q14695 138 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 TOMM7Q9P0U1 55 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 HERC2O95714 4834 aa6.48□□□□□ -1.37
ECHDC3-203ENST00000422887 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
ECHDC3-203ENST00000422887 CKS1BP61024 79 aa6.47□□□□□ -1.37
ECHDC3-203ENST00000422887 RNF151Q2KHN1 245 aa6.47□□□□□ -1.37
ECHDC3-203ENST00000422887 C6orf226Q5I0X4 101 aa6.47□□□□□ -1.37
ECHDC3-203ENST00000422887 COX7B2Q8TF08 81 aa6.47□□□□□ -1.37
ECHDC3-203ENST00000422887 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.38
ECHDC3-203ENST00000422887 SLPIP03973 132 aa6.46□□□□□ -1.38
ECHDC3-203ENST00000422887 Q6ZRU5 148 aa6.46□□□□□ -1.38
ECHDC3-203ENST00000422887 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
ECHDC3-203ENST00000422887 LINC00526Q96FQ7 95 aa6.45□□□□□ -1.38
ECHDC3-203ENST00000422887 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
ECHDC3-203ENST00000422887 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
ECHDC3-203ENST00000422887 VPS13BQ7Z7G8 4022 aa6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 FUSP35637 526 aaKnown RBP eCLIP6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
ECHDC3-203ENST00000422887 E9PLD3 99 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 LEPROTO15243 131 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 NMUP48645 174 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 KRTAP10-1P60331 282 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 C2orf82Q6UX34 121 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 Q6ZSA8 131 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 FAT1Q14517 4588 aa6.42□□□□□ -1.38
ECHDC3-203ENST00000422887 NDUFC2-KCTD14E9PQ53 114 aa6.41□□□□□ -1.38
ECHDC3-203ENST00000422887 HERV-K104P63124 156 aa6.41□□□□□ -1.38
ECHDC3-203ENST00000422887 LINC01620Q4KN68 170 aa6.41□□□□□ -1.38
ECHDC3-203ENST00000422887 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
ECHDC3-203ENST00000422887 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 J3QQQ9 107 aa6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 CDK2AP2O75956 126 aa6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 COX17Q14061 63 aa6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 ZNF625Q96I27 306 aaPredicted RBP6.4□□□□□ -1.38
ECHDC3-203ENST00000422887 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
ECHDC3-203ENST00000422887 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
ECHDC3-203ENST00000422887 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
ECHDC3-203ENST00000422887 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
ECHDC3-203ENST00000422887 A0A096LNI7 61 aa6.38□□□□□ -1.39
ECHDC3-203ENST00000422887 SCGB1D1O95968 90 aa6.38□□□□□ -1.39
ECHDC3-203ENST00000422887 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
ECHDC3-203ENST00000422887 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 TSPEAR-AS2P59090 65 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 GAGE2BQ13066 116 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 Q6ZRP5 223 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 ATOH7Q8N100 152 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 STPG4Q8N801 248 aa6.37□□□□□ -1.39
ECHDC3-203ENST00000422887 C9orf116Q5BN46 136 aaPredicted RBP6.36□□□□□ -1.39
ECHDC3-203ENST00000422887 MEIG1Q5JSS6 88 aa6.36□□□□□ -1.39
ECHDC3-203ENST00000422887 FAM30AQ9NZY2 134 aa6.36□□□□□ -1.39
ECHDC3-203ENST00000422887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
ECHDC3-203ENST00000422887 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
ECHDC3-203ENST00000422887 CHTF8P0CG12 524 aa6.35□□□□□ -1.39
ECHDC3-203ENST00000422887 MAJINQ3KP22 176 aa6.35□□□□□ -1.39
ECHDC3-203ENST00000422887 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
ECHDC3-203ENST00000422887 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
ECHDC3-203ENST00000422887 IGKV2D-26A0A0A0MRZ7 120 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 ZNF815PA8K554 130 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 PFN2P35080 140 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 GAGE2EQ4V326 116 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 GAGE2DQ9UEU5 116 aa6.34□□□□□ -1.39
ECHDC3-203ENST00000422887 ABCA13Q86UQ4 5058 aa6.34□□□□□ -1.4
ECHDC3-203ENST00000422887 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 A0A087WYN8 130 aa6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 PANO1I0J062 215 aa6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 XGP55808 180 aa6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 LINC00158P58513 81 aa6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
ECHDC3-203ENST00000422887 A0A0J9YXY3 114 aa6.32□□□□□ -1.4
ECHDC3-203ENST00000422887 EPM2AB3EWF7 344 aa6.32□□□□□ -1.4
ECHDC3-203ENST00000422887 TIMM17BO60830 172 aa6.32□□□□□ -1.4
ECHDC3-203ENST00000422887 VAMP8Q9BV40 100 aa6.32□□□□□ -1.4
ECHDC3-203ENST00000422887 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 PYY3Q5JQD4 70 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 C9orf129Q5T035 196 aaKnown RBP6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 SND1-IT1Q9HBX3 110 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
ECHDC3-203ENST00000422887 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
ECHDC3-203ENST00000422887 SCGB1D4Q6XE38 83 aa6.3□□□□□ -1.4
ECHDC3-203ENST00000422887 HAMPP81172 84 aa6.29□□□□□ -1.4
ECHDC3-203ENST00000422887 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
ECHDC3-203ENST00000422887 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
ECHDC3-203ENST00000422887 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms