RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CXCL5P42830 114 aa11.35□□□□□ -0.59
LINC00271-201ENST00000421378 EPPK1P58107 5090 aaKnown RBP11.34□□□□□ -0.59
LINC00271-201ENST00000421378 HERVK_113P61574 105 aa11.34□□□□□ -0.59
LINC00271-201ENST00000421378 AKR1D1P51857 326 aa11.33□□□□□ -0.6
LINC00271-201ENST00000421378 UNQ6190/PRO20217Q6UXQ8 127 aa11.33□□□□□ -0.6
LINC00271-201ENST00000421378 DNAH5Q8TE73 4624 aa11.33□□□□□ -0.6
LINC00271-201ENST00000421378 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
LINC00271-201ENST00000421378 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
LINC00271-201ENST00000421378 TRBV30A0A0K0K1B3 111 aa11.3□□□□□ -0.6
LINC00271-201ENST00000421378 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
LINC00271-201ENST00000421378 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
LINC00271-201ENST00000421378 RNF151Q2KHN1 245 aa11.29□□□□□ -0.6
LINC00271-201ENST00000421378 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 SDIM1Q6ZPB5 146 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 STPG4Q8N801 248 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 PKIGQ9Y2B9 76 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 E9PLD3 99 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 LEPROTO15243 131 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
LINC00271-201ENST00000421378 J3QQQ9 107 aa11.26□□□□□ -0.61
LINC00271-201ENST00000421378 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
LINC00271-201ENST00000421378 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
LINC00271-201ENST00000421378 ZNF625Q96I27 306 aaPredicted RBP11.26□□□□□ -0.61
LINC00271-201ENST00000421378 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
LINC00271-201ENST00000421378 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
LINC00271-201ENST00000421378 LRP1BQ9NZR2 4599 aa11.25□□□□□ -0.61
LINC00271-201ENST00000421378 LGALS3P17931 250 aaKnown RBP11.24□□□□□ -0.61
LINC00271-201ENST00000421378 RPL18AQ02543 176 aaKnown RBP11.24□□□□□ -0.61
LINC00271-201ENST00000421378 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
LINC00271-201ENST00000421378 A0A096LNI7 61 aa11.23□□□□□ -0.61
LINC00271-201ENST00000421378 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
LINC00271-201ENST00000421378 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
LINC00271-201ENST00000421378 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
LINC00271-201ENST00000421378 Q6ZSA8 131 aa11.23□□□□□ -0.61
LINC00271-201ENST00000421378 NMUP48645 174 aa11.22□□□□□ -0.61
LINC00271-201ENST00000421378 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
LINC00271-201ENST00000421378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.22□□□□□ -0.61
LINC00271-201ENST00000421378 IGKV2D-26A0A0A0MRZ7 120 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 HSBP1L1C9JCN9 74 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 CHTF8P0CG12 524 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 PTTG1IPP53801 180 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 HERV-K104P63124 156 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 JOSD1Q15040 202 aaPredicted RBP11.21□□□□□ -0.61
LINC00271-201ENST00000421378 Q6ZRP5 223 aa11.21□□□□□ -0.61
LINC00271-201ENST00000421378 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 PANO1I0J062 215 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 SPACA4Q8TDM5 124 aa11.2□□□□□ -0.62
LINC00271-201ENST00000421378 PFN2P35080 140 aa11.19□□□□□ -0.62
LINC00271-201ENST00000421378 CIRBPQ14011 172 aaKnown RBP11.19□□□□□ -0.62
LINC00271-201ENST00000421378 COX17Q14061 63 aa11.19□□□□□ -0.62
LINC00271-201ENST00000421378 GAGE2EQ4V326 116 aa11.19□□□□□ -0.62
LINC00271-201ENST00000421378 GAGE2DQ9UEU5 116 aa11.19□□□□□ -0.62
LINC00271-201ENST00000421378 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
LINC00271-201ENST00000421378 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
LINC00271-201ENST00000421378 ZNF815PA8K554 130 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 PYY3Q5JQD4 70 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
LINC00271-201ENST00000421378 LINC00158P58513 81 aa11.15□□□□□ -0.62
LINC00271-201ENST00000421378 HAMPP81172 84 aa11.15□□□□□ -0.62
LINC00271-201ENST00000421378 A0A0U1RRA0 63 aa11.14□□□□□ -0.63
LINC00271-201ENST00000421378 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
LINC00271-201ENST00000421378 A0A087WYN8 130 aa11.13□□□□□ -0.63
LINC00271-201ENST00000421378 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
LINC00271-201ENST00000421378 XGP55808 180 aa11.13□□□□□ -0.63
LINC00271-201ENST00000421378 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
LINC00271-201ENST00000421378 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
LINC00271-201ENST00000421378 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
LINC00271-201ENST00000421378 PCP2Q8IVA1 136 aa11.12□□□□□ -0.63
LINC00271-201ENST00000421378 VAMP8Q9BV40 100 aa11.12□□□□□ -0.63
LINC00271-201ENST00000421378 DNAH8Q96JB1 4490 aa11.12□□□□□ -0.63
LINC00271-201ENST00000421378 APOBP04114 4563 aaKnown RBP11.12□□□□□ -0.63
LINC00271-201ENST00000421378 PAM16Q9Y3D7 125 aa11.11□□□□□ -0.63
LINC00271-201ENST00000421378 MIR7-3HGQ8N6C7 128 aa11.1□□□□□ -0.63
LINC00271-201ENST00000421378 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
LINC00271-201ENST00000421378 PLAC8Q9NZF1 115 aa11.1□□□□□ -0.63
LINC00271-201ENST00000421378 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
LINC00271-201ENST00000421378 BIRC6Q9NR09 4857 aa11.09□□□□□ -0.63
LINC00271-201ENST00000421378 FAM168BA1KXE4 195 aa11.08□□□□□ -0.64
LINC00271-201ENST00000421378 SPATA45Q537H7 98 aa11.08□□□□□ -0.64
LINC00271-201ENST00000421378 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
LINC00271-201ENST00000421378 DAND5Q8N907 189 aa11.07□□□□□ -0.64
LINC00271-201ENST00000421378 FAM19A5Q7Z5A7 132 aaPredicted RBP11.07□□□□□ -0.64
LINC00271-201ENST00000421378 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
LINC00271-201ENST00000421378 TIMM17BO60830 172 aa11.06□□□□□ -0.64
LINC00271-201ENST00000421378 LITAFQ99732 161 aa11.05□□□□□ -0.64
LINC00271-201ENST00000421378 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
LINC00271-201ENST00000421378 COX8AP10176 69 aa11.04□□□□□ -0.64
LINC00271-201ENST00000421378 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
LINC00271-201ENST00000421378 SERTAD4-AS1Q5TG53 156 aa11.04□□□□□ -0.64
LINC00271-201ENST00000421378 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
LINC00271-201ENST00000421378 TMEM238C9JI98 176 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms