RNA–Protein interactions for RNA: ENST00000419721.5

C1GALT1-203, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 3

Gene C1GALT1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-203ENST00000419721 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
C1GALT1-203ENST00000419721 NDUFA6P56556 154 aa13.18□□□□□ -0.3
C1GALT1-203ENST00000419721 KRTAP10-4P60372 401 aaPredicted RBP13.18□□□□□ -0.3
C1GALT1-203ENST00000419721 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-203ENST00000419721 C2orf82Q6UX34 121 aa13.18□□□□□ -0.3
C1GALT1-203ENST00000419721 TLX1NBP0CAT3 122 aa13.17□□□□□ -0.3
C1GALT1-203ENST00000419721 LINC00310P59036 64 aa13.16□□□□□ -0.3
C1GALT1-203ENST00000419721 C6orf226Q5I0X4 101 aa13.16□□□□□ -0.3
C1GALT1-203ENST00000419721 RPL37AP61513 92 aaKnown RBP13.15□□□□□ -0.3
C1GALT1-203ENST00000419721 SERF1AO75920 110 aa13.14□□□□□ -0.31
C1GALT1-203ENST00000419721 CKS1BP61024 79 aa13.14□□□□□ -0.31
C1GALT1-203ENST00000419721 FAM19A2Q8N3H0 131 aa13.14□□□□□ -0.31
C1GALT1-203ENST00000419721 IFI27L1Q96BM0 104 aa13.14□□□□□ -0.31
C1GALT1-203ENST00000419721 H3BRM9 83 aa13.13□□□□□ -0.31
C1GALT1-203ENST00000419721 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
C1GALT1-203ENST00000419721 CXCL5P42830 114 aa13.13□□□□□ -0.31
C1GALT1-203ENST00000419721 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
C1GALT1-203ENST00000419721 Q6ZRP5 223 aa13.12□□□□□ -0.31
C1GALT1-203ENST00000419721 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
C1GALT1-203ENST00000419721 TRAV12-1A0A0B4J245 112 aa13.11□□□□□ -0.31
C1GALT1-203ENST00000419721 CHTOPQ9Y3Y2 248 aaKnown RBP13.11□□□□□ -0.31
C1GALT1-203ENST00000419721 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
C1GALT1-203ENST00000419721 F8VRH5 84 aa13.1□□□□□ -0.31
C1GALT1-203ENST00000419721 C9orf116Q5BN46 136 aaPredicted RBP13.1□□□□□ -0.31
C1GALT1-203ENST00000419721 C7orf33Q8WU49 177 aa13.1□□□□□ -0.31
C1GALT1-203ENST00000419721 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
C1GALT1-203ENST00000419721 NDUFC2-KCTD14E9PQ53 114 aa13.09□□□□□ -0.31
C1GALT1-203ENST00000419721 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
C1GALT1-203ENST00000419721 NUPR1O60356 82 aa13.08□□□□□ -0.32
C1GALT1-203ENST00000419721 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
C1GALT1-203ENST00000419721 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
C1GALT1-203ENST00000419721 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
C1GALT1-203ENST00000419721 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BKO60814 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BJP06899 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BOP23527 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BBP33778 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BDP58876 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BCP62807 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST2H2BEQ16778 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BHQ93079 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BNQ99877 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 HIST1H2BMQ99879 126 aa13.06□□□□□ -0.32
C1GALT1-203ENST00000419721 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
C1GALT1-203ENST00000419721 HSPB8Q9UJY1 196 aa13.03□□□□□ -0.32
C1GALT1-203ENST00000419721 MYCBP2O75592 4640 aa13.02□□□□□ -0.33
C1GALT1-203ENST00000419721 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.33
C1GALT1-203ENST00000419721 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.33
C1GALT1-203ENST00000419721 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
C1GALT1-203ENST00000419721 S100A1P23297 94 aa13.01□□□□□ -0.33
C1GALT1-203ENST00000419721 ODF1Q14990 250 aa13.01□□□□□ -0.33
C1GALT1-203ENST00000419721 FLG2Q5D862 2391 aaPredicted RBP13.01□□□□□ -0.33
C1GALT1-203ENST00000419721 PRR3P79522 188 aaKnown RBP13□□□□□ -0.33
C1GALT1-203ENST00000419721 TMEM223A0PJW6 202 aa12.99□□□□□ -0.33
C1GALT1-203ENST00000419721 H0Y8G0 127 aa12.99□□□□□ -0.33
C1GALT1-203ENST00000419721 FABP4P15090 132 aa12.99□□□□□ -0.33
C1GALT1-203ENST00000419721 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
C1GALT1-203ENST00000419721 FAM19A5Q7Z5A7 132 aaPredicted RBP12.99□□□□□ -0.33
C1GALT1-203ENST00000419721 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
C1GALT1-203ENST00000419721 KRTAP7-1Q8IUC3 87 aa12.98□□□□□ -0.33
C1GALT1-203ENST00000419721 XAGE1AQ9HD64 81 aa12.96□□□□□ -0.33
C1GALT1-203ENST00000419721 SFTA2Q6UW10 78 aa12.95□□□□□ -0.34
C1GALT1-203ENST00000419721 M0QXV9 152 aa12.93□□□□□ -0.34
C1GALT1-203ENST00000419721 COA6Q5JTJ3 125 aaKnown RBP12.93□□□□□ -0.34
C1GALT1-203ENST00000419721 MAP1LC3CQ9BXW4 147 aa12.93□□□□□ -0.34
C1GALT1-203ENST00000419721 PLNP26678 52 aa12.92□□□□□ -0.34
C1GALT1-203ENST00000419721 SERTAD4-AS1Q5TG53 156 aa12.92□□□□□ -0.34
C1GALT1-203ENST00000419721 ZNF625Q96I27 306 aaPredicted RBP12.92□□□□□ -0.34
C1GALT1-203ENST00000419721 KRTAP29-1A8MX34 341 aaPredicted RBP12.91□□□□□ -0.34
C1GALT1-203ENST00000419721 PSORS1C2Q9UIG4 136 aa12.91□□□□□ -0.34
C1GALT1-203ENST00000419721 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
C1GALT1-203ENST00000419721 FAT3Q8TDW7 4589 aa12.9□□□□□ -0.34
C1GALT1-203ENST00000419721 DPM2O94777 84 aa12.9□□□□□ -0.34
C1GALT1-203ENST00000419721 PFN2P35080 140 aa12.9□□□□□ -0.34
C1GALT1-203ENST00000419721 COX17Q14061 63 aa12.9□□□□□ -0.34
C1GALT1-203ENST00000419721 KRTAP11-1Q8IUC1 163 aa12.88□□□□□ -0.35
C1GALT1-203ENST00000419721 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
C1GALT1-203ENST00000419721 PLA2G2DQ9UNK4 145 aa12.88□□□□□ -0.35
C1GALT1-203ENST00000419721 LRP1Q07954 4544 aaKnown RBP12.87□□□□□ -0.35
C1GALT1-203ENST00000419721 OXTP01178 125 aa12.87□□□□□ -0.35
C1GALT1-203ENST00000419721 IGKCP01834 107 aa12.87□□□□□ -0.35
C1GALT1-203ENST00000419721 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
C1GALT1-203ENST00000419721 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
C1GALT1-203ENST00000419721 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
C1GALT1-203ENST00000419721 UBE2BP63146 152 aa12.85□□□□□ -0.35
C1GALT1-203ENST00000419721 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
C1GALT1-203ENST00000419721 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.357e-12■■■■■ 38.4
C1GALT1-203ENST00000419721 DMBT1Q9UGM3 2413 aaPredicted RBP12.83□□□□□ -0.35
C1GALT1-203ENST00000419721 IGLV5-37A0A075B6J1 123 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 J3QL48 77 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 LEPROTO15243 131 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 HERVK_113P61574 105 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 SPINK6Q6UWN8 80 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
C1GALT1-203ENST00000419721 TSPEAR-AS2P59090 65 aa12.82□□□□□ -0.36
C1GALT1-203ENST00000419721 HERV-K104P63124 156 aa12.82□□□□□ -0.36
C1GALT1-203ENST00000419721 MRPL55Q7Z7F7 128 aaKnown RBP12.82□□□□□ -0.36
C1GALT1-203ENST00000419721 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms