RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 C9orf116Q5BN46 136 aaPredicted RBP8.9□□□□□ -0.98
SLC13A3-205ENST00000417157 PDZD11Q5EBL8 140 aa8.9□□□□□ -0.98
SLC13A3-205ENST00000417157 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
SLC13A3-205ENST00000417157 CBLN2Q8IUK8 224 aa8.9□□□□□ -0.98
SLC13A3-205ENST00000417157 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
SLC13A3-205ENST00000417157 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
SLC13A3-205ENST00000417157 A0A096LNJ9 63 aa8.89□□□□□ -0.99
SLC13A3-205ENST00000417157 NDUFA6P56556 154 aa8.89□□□□□ -0.99
SLC13A3-205ENST00000417157 Q6ZRP5 223 aa8.89□□□□□ -0.99
SLC13A3-205ENST00000417157 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
SLC13A3-205ENST00000417157 MYCBP2O75592 4640 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 F8VRH5 84 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
SLC13A3-205ENST00000417157 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
SLC13A3-205ENST00000417157 IGLC3P0DOY3 106 aa8.87□□□□□ -0.99
SLC13A3-205ENST00000417157 HNRNPA3P51991 378 aaKnown RBP8.87□□□□□ -0.99
SLC13A3-205ENST00000417157 PMCHL1Q16048 86 aa8.87□□□□□ -0.99
SLC13A3-205ENST00000417157 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
SLC13A3-205ENST00000417157 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
SLC13A3-205ENST00000417157 BAGE3Q86Y29 109 aa8.85□□□□□ -0.99
SLC13A3-205ENST00000417157 HSBP1O75506 76 aa8.84□□□□□ -0.99
SLC13A3-205ENST00000417157 SPINK8P0C7L1 97 aa8.84□□□□□ -0.99
SLC13A3-205ENST00000417157 TRGC2P03986 189 aa8.83□□□□□ -1
SLC13A3-205ENST00000417157 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
SLC13A3-205ENST00000417157 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
SLC13A3-205ENST00000417157 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
SLC13A3-205ENST00000417157 FAM168BA1KXE4 195 aa8.81□□□□□ -1
SLC13A3-205ENST00000417157 M0QXV9 152 aa8.81□□□□□ -1
SLC13A3-205ENST00000417157 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
SLC13A3-205ENST00000417157 SFTA2Q6UW10 78 aa8.81□□□□□ -1
SLC13A3-205ENST00000417157 CHTOPQ9Y3Y2 248 aaKnown RBP8.81□□□□□ -1
SLC13A3-205ENST00000417157 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
SLC13A3-205ENST00000417157 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
SLC13A3-205ENST00000417157 C9orf129Q5T035 196 aaKnown RBP8.8□□□□□ -1
SLC13A3-205ENST00000417157 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
SLC13A3-205ENST00000417157 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
SLC13A3-205ENST00000417157 UBE2BP63146 152 aa8.79□□□□□ -1
SLC13A3-205ENST00000417157 C1orf137Q5JT78 98 aa8.79□□□□□ -1
SLC13A3-205ENST00000417157 REG3GQ6UW15 175 aa8.79□□□□□ -1
SLC13A3-205ENST00000417157 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
SLC13A3-205ENST00000417157 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SLC13A3-205ENST00000417157 ODF1Q14990 250 aa8.78□□□□□ -1
SLC13A3-205ENST00000417157 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
SLC13A3-205ENST00000417157 HERC1Q15751 4861 aa8.77□□□□□ -1
SLC13A3-205ENST00000417157 COLCA2A8K830 154 aa8.77□□□□□ -1.01
SLC13A3-205ENST00000417157 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
SLC13A3-205ENST00000417157 LEPROTL1O95214 131 aa8.76□□□□□ -1.01
SLC13A3-205ENST00000417157 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
SLC13A3-205ENST00000417157 SERF1AO75920 110 aa8.75□□□□□ -1.01
SLC13A3-205ENST00000417157 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.01
SLC13A3-205ENST00000417157 HSPB8Q9UJY1 196 aa8.75□□□□□ -1.01
SLC13A3-205ENST00000417157 COX17Q14061 63 aa8.74□□□□□ -1.01
SLC13A3-205ENST00000417157 SERTAD4-AS1Q5TG53 156 aa8.74□□□□□ -1.01
SLC13A3-205ENST00000417157 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
SLC13A3-205ENST00000417157 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
SLC13A3-205ENST00000417157 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
SLC13A3-205ENST00000417157 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
SLC13A3-205ENST00000417157 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
SLC13A3-205ENST00000417157 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SLC13A3-205ENST00000417157 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
SLC13A3-205ENST00000417157 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 PFN2P35080 140 aa8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 MRPL55Q7Z7F7 128 aaKnown RBP8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
SLC13A3-205ENST00000417157 H0Y8G0 127 aa8.71□□□□□ -1.02
SLC13A3-205ENST00000417157 NUPR1O60356 82 aa8.71□□□□□ -1.02
SLC13A3-205ENST00000417157 LINC00310P59036 64 aa8.71□□□□□ -1.02
SLC13A3-205ENST00000417157 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
SLC13A3-205ENST00000417157 DIRC1Q969H9 104 aa8.71□□□□□ -1.02
SLC13A3-205ENST00000417157 PLNP26678 52 aa8.7□□□□□ -1.02
SLC13A3-205ENST00000417157 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
SLC13A3-205ENST00000417157 KRTAP11-1Q8IUC1 163 aa8.69□□□□□ -1.02
SLC13A3-205ENST00000417157 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
SLC13A3-205ENST00000417157 IGLV5-37A0A075B6J1 123 aa8.68□□□□□ -1.02
SLC13A3-205ENST00000417157 SCO1O75880 301 aa8.68□□□□□ -1.02
SLC13A3-205ENST00000417157 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 H0Y9J4 135 aa8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 FABP4P15090 132 aa8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 HERV-K104P63124 156 aa8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 MAP1LC3CQ9BXW4 147 aa8.67□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 DPM2O94777 84 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HERVK_113P61574 105 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
SLC13A3-205ENST00000417157 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms