RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
SEMA3B-201ENST00000416295 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
SEMA3B-201ENST00000416295 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
SEMA3B-201ENST00000416295 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
SEMA3B-201ENST00000416295 CKS1BP61024 79 aa11.38□□□□□ -0.59
SEMA3B-201ENST00000416295 SMIM1B2RUZ4 78 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 H3BRM9 83 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 IGLC3P0DOY3 106 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 C2orf82Q6UX34 121 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
SEMA3B-201ENST00000416295 CXCL5P42830 114 aa11.36□□□□□ -0.59
SEMA3B-201ENST00000416295 SCO1O75880 301 aa11.35□□□□□ -0.59
SEMA3B-201ENST00000416295 KRTAP10-4P60372 401 aaPredicted RBP11.34□□□□□ -0.59
SEMA3B-201ENST00000416295 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
SEMA3B-201ENST00000416295 HERC1Q15751 4861 aa11.34□□□□□ -0.59
SEMA3B-201ENST00000416295 F8VRH5 84 aa11.33□□□□□ -0.6
SEMA3B-201ENST00000416295 SERF1AO75920 110 aa11.33□□□□□ -0.6
SEMA3B-201ENST00000416295 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
SEMA3B-201ENST00000416295 FAM19A2Q8N3H0 131 aa11.33□□□□□ -0.6
SEMA3B-201ENST00000416295 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
SEMA3B-201ENST00000416295 NDUFC2-KCTD14E9PQ53 114 aa11.32□□□□□ -0.6
SEMA3B-201ENST00000416295 Q6ZRP5 223 aa11.32□□□□□ -0.6
SEMA3B-201ENST00000416295 MYCBP2O75592 4640 aa11.32□□□□□ -0.6
SEMA3B-201ENST00000416295 TRAV12-1A0A0B4J245 112 aa11.31□□□□□ -0.6
SEMA3B-201ENST00000416295 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
SEMA3B-201ENST00000416295 CHTOPQ9Y3Y2 248 aaKnown RBP11.31□□□□□ -0.6
SEMA3B-201ENST00000416295 LINC00310P59036 64 aa11.3□□□□□ -0.6
SEMA3B-201ENST00000416295 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
SEMA3B-201ENST00000416295 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
SEMA3B-201ENST00000416295 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
SEMA3B-201ENST00000416295 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
SEMA3B-201ENST00000416295 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
SEMA3B-201ENST00000416295 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
SEMA3B-201ENST00000416295 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
SEMA3B-201ENST00000416295 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
SEMA3B-201ENST00000416295 J3QL48 77 aa11.27□□□□□ -0.61
SEMA3B-201ENST00000416295 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BKO60814 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
SEMA3B-201ENST00000416295 NUPR1O60356 82 aa11.24□□□□□ -0.61
SEMA3B-201ENST00000416295 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
SEMA3B-201ENST00000416295 SFTA2Q6UW10 78 aa11.23□□□□□ -0.61
SEMA3B-201ENST00000416295 FAM168BA1KXE4 195 aa11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 H0Y8G0 127 aa11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 S100A1P23297 94 aa11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 ODF1Q14990 250 aa11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
SEMA3B-201ENST00000416295 KRTAP29-1A8MX34 341 aaPredicted RBP11.21□□□□□ -0.61
SEMA3B-201ENST00000416295 FABP4P15090 132 aa11.21□□□□□ -0.61
SEMA3B-201ENST00000416295 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
SEMA3B-201ENST00000416295 TMEM223A0PJW6 202 aa11.2□□□□□ -0.62
SEMA3B-201ENST00000416295 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
SEMA3B-201ENST00000416295 XAGE1AQ9HD64 81 aa11.2□□□□□ -0.62
SEMA3B-201ENST00000416295 M0QXV9 152 aa11.19□□□□□ -0.62
SEMA3B-201ENST00000416295 PLNP26678 52 aa11.18□□□□□ -0.62
SEMA3B-201ENST00000416295 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
SEMA3B-201ENST00000416295 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
SEMA3B-201ENST00000416295 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 OXTP01178 125 aa11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 COX17Q14061 63 aa11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
SEMA3B-201ENST00000416295 DPM2O94777 84 aa11.14□□□□□ -0.63
SEMA3B-201ENST00000416295 PFN2P35080 140 aa11.14□□□□□ -0.63
SEMA3B-201ENST00000416295 SERTAD4-AS1Q5TG53 156 aa11.14□□□□□ -0.63
SEMA3B-201ENST00000416295 UBE2BP63146 152 aa11.13□□□□□ -0.63
SEMA3B-201ENST00000416295 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
SEMA3B-201ENST00000416295 IGKCP01834 107 aa11.12□□□□□ -0.63
SEMA3B-201ENST00000416295 LBHQ53QV2 105 aaPredicted RBP11.12□□□□□ -0.63
SEMA3B-201ENST00000416295 HERVK_113P61574 105 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 PMCHL2Q9BQD1 86 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
SEMA3B-201ENST00000416295 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
SEMA3B-201ENST00000416295 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
SEMA3B-201ENST00000416295 HERV-K104P63124 156 aa11.09□□□□□ -0.63
SEMA3B-201ENST00000416295 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
SEMA3B-201ENST00000416295 LEPROTO15243 131 aa11.08□□□□□ -0.64
SEMA3B-201ENST00000416295 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
SEMA3B-201ENST00000416295 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
SEMA3B-201ENST00000416295 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
SEMA3B-201ENST00000416295 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
SEMA3B-201ENST00000416295 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
SEMA3B-201ENST00000416295 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
SEMA3B-201ENST00000416295 LINC00158P58513 81 aa11.07□□□□□ -0.64
SEMA3B-201ENST00000416295 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms