RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NDUFA1O15239 70 aa19.66■□□□□ 0.74
CSNK1E-206ENST00000413574 IGLV5-39A0A0G2JS06 123 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 DPM2O94777 84 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 TMEM223A0PJW6 202 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 C5orf52A6NGY3 159 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 PLNP26678 52 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 PET117Q6UWS5 81 aa19.65■□□□□ 0.74
CSNK1E-206ENST00000413574 IGKCP01834 107 aa19.63■□□□□ 0.73
CSNK1E-206ENST00000413574 CKS1BP61024 79 aa19.63■□□□□ 0.73
CSNK1E-206ENST00000413574 C6orf48Q9UBA6 75 aa19.63■□□□□ 0.73
CSNK1E-206ENST00000413574 F8WDY8 70 aa19.62■□□□□ 0.73
CSNK1E-206ENST00000413574 LINC01545Q5VT33 79 aa19.62■□□□□ 0.73
CSNK1E-206ENST00000413574 HAMPP81172 84 aa19.62■□□□□ 0.73
CSNK1E-206ENST00000413574 PANO1I0J062 215 aa19.6■□□□□ 0.73
CSNK1E-206ENST00000413574 RYR1P21817 5038 aa19.6■□□□□ 0.73
CSNK1E-206ENST00000413574 Q6ZSA8 131 aa19.58■□□□□ 0.73
CSNK1E-206ENST00000413574 TMA7Q9Y2S6 64 aaKnown RBP19.58■□□□□ 0.73
CSNK1E-206ENST00000413574 CHTF8P0CG12 524 aa19.58■□□□□ 0.72
CSNK1E-206ENST00000413574 C9orf116Q5BN46 136 aaPredicted RBP19.58■□□□□ 0.72
CSNK1E-206ENST00000413574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP19.58■□□□□ 0.72
CSNK1E-206ENST00000413574 RNF151Q2KHN1 245 aa19.56■□□□□ 0.72
CSNK1E-206ENST00000413574 HSPG2P98160 4391 aa19.55■□□□□ 0.72
CSNK1E-206ENST00000413574 XGP55808 180 aa19.55■□□□□ 0.72
CSNK1E-206ENST00000413574 A0A096LNI7 61 aa19.54■□□□□ 0.72
CSNK1E-206ENST00000413574 IGKV2-24A0A0C4DH68 120 aa19.54■□□□□ 0.72
CSNK1E-206ENST00000413574 TRBV30A0A0K0K1B3 111 aa19.54■□□□□ 0.72
CSNK1E-206ENST00000413574 CXCL5P42830 114 aa19.54■□□□□ 0.72
CSNK1E-206ENST00000413574 LOC107984640A0A0U1RRK4 108 aa19.52■□□□□ 0.72
CSNK1E-206ENST00000413574 CDK2AP2O75956 126 aa19.51■□□□□ 0.71
CSNK1E-206ENST00000413574 RPL18AQ02543 176 aaKnown RBP19.51■□□□□ 0.71
CSNK1E-206ENST00000413574 GAGE2BQ13066 116 aa19.51■□□□□ 0.71
CSNK1E-206ENST00000413574 C20orf202A1L168 122 aa19.48■□□□□ 0.71
CSNK1E-206ENST00000413574 TSPEAR-AS2P59090 65 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 HERVK_113P61574 105 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 Q6ZRP5 223 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 SPACA4Q8TDM5 124 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 PTTG1IPP53801 180 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 CIRBPQ14011 172 aaKnown RBP19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 SCXQ7RTU7 201 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 ATOH7Q8N100 152 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 STPG4Q8N801 248 aa19.47■□□□□ 0.71
CSNK1E-206ENST00000413574 MAJINQ3KP22 176 aa19.46■□□□□ 0.71
CSNK1E-206ENST00000413574 DPH3Q96FX2 82 aa19.46■□□□□ 0.71
CSNK1E-206ENST00000413574 ZNF625Q96I27 306 aaPredicted RBP19.46■□□□□ 0.71
CSNK1E-206ENST00000413574 LEPROTO15243 131 aa19.45■□□□□ 0.7
CSNK1E-206ENST00000413574 TLX1NBP0CAT3 122 aa19.45■□□□□ 0.7
CSNK1E-206ENST00000413574 CIRBP-AS1Q8TBR5 109 aa19.45■□□□□ 0.7
CSNK1E-206ENST00000413574 PKIGQ9Y2B9 76 aa19.45■□□□□ 0.7
CSNK1E-206ENST00000413574 NDUFC2-KCTD14E9PQ53 114 aa19.43■□□□□ 0.7
CSNK1E-206ENST00000413574 GAGE2EQ4V326 116 aa19.43■□□□□ 0.7
CSNK1E-206ENST00000413574 GAGE2DQ9UEU5 116 aa19.43■□□□□ 0.7
CSNK1E-206ENST00000413574 PLEKHB2Q96CS7 222 aa19.41■□□□□ 0.7
CSNK1E-206ENST00000413574 J3QQQ9 107 aa19.4■□□□□ 0.7
CSNK1E-206ENST00000413574 A0A087WYN8 130 aa19.4■□□□□ 0.7
CSNK1E-206ENST00000413574 E9PLD3 99 aa19.4■□□□□ 0.7
CSNK1E-206ENST00000413574 NDUFA12Q9UI09 145 aa19.39■□□□□ 0.69
CSNK1E-206ENST00000413574 PFN2P35080 140 aa19.38■□□□□ 0.69
CSNK1E-206ENST00000413574 LINC00474Q9P2X8 69 aa19.38■□□□□ 0.69
CSNK1E-206ENST00000413574 FAT1Q14517 4588 aa19.37■□□□□ 0.69
CSNK1E-206ENST00000413574 HERC2O95714 4834 aa19.37■□□□□ 0.69
CSNK1E-206ENST00000413574 SMR3BP02814 79 aaPredicted RBP19.36■□□□□ 0.69
CSNK1E-206ENST00000413574 SFTA2Q6UW10 78 aa19.36■□□□□ 0.69
CSNK1E-206ENST00000413574 ERG28Q9UKR5 140 aa19.36■□□□□ 0.69
CSNK1E-206ENST00000413574 IGKV2D-26A0A0A0MRZ7 120 aa19.35■□□□□ 0.69
CSNK1E-206ENST00000413574 LGALS3P17931 250 aaKnown RBP19.35■□□□□ 0.69
CSNK1E-206ENST00000413574 KRTAP17-1Q9BYP8 105 aa19.35■□□□□ 0.69
CSNK1E-206ENST00000413574 SCGB1D1O95968 90 aa19.33■□□□□ 0.69
CSNK1E-206ENST00000413574 C9orf129Q5T035 196 aaKnown RBP19.33■□□□□ 0.69
CSNK1E-206ENST00000413574 XAGE1AQ9HD64 81 aa19.33■□□□□ 0.69
CSNK1E-206ENST00000413574 A0A1W2PNN7 141 aa19.33■□□□□ 0.68
CSNK1E-206ENST00000413574 ANKRD39Q53RE8 183 aa19.33■□□□□ 0.68
CSNK1E-206ENST00000413574 PLAC8Q9NZF1 115 aa19.33■□□□□ 0.68
CSNK1E-206ENST00000413574 MYMXA0A1B0GTQ4 84 aa19.32■□□□□ 0.68
CSNK1E-206ENST00000413574 FAM168BA1KXE4 195 aa19.31■□□□□ 0.68
CSNK1E-206ENST00000413574 AKR1D1P51857 326 aa19.31■□□□□ 0.68
CSNK1E-206ENST00000413574 A0A0U1RRA0 63 aa19.3■□□□□ 0.68
CSNK1E-206ENST00000413574 HERV-K104P63124 156 aa19.29■□□□□ 0.68
CSNK1E-206ENST00000413574 TTTY13Q9BZ97 58 aa19.29■□□□□ 0.68
CSNK1E-206ENST00000413574 SMIM13P0DJ93 91 aa19.27■□□□□ 0.68
CSNK1E-206ENST00000413574 NMUP48645 174 aa19.27■□□□□ 0.68
CSNK1E-206ENST00000413574 COX17Q14061 63 aa19.27■□□□□ 0.68
CSNK1E-206ENST00000413574 MEIG1Q5JSS6 88 aa19.27■□□□□ 0.68
CSNK1E-206ENST00000413574 LINC00158P58513 81 aa19.26■□□□□ 0.67
CSNK1E-206ENST00000413574 KRTAP7-1Q8IUC3 87 aa19.24■□□□□ 0.67
CSNK1E-206ENST00000413574 FAM19A5Q7Z5A7 132 aaPredicted RBP19.23■□□□□ 0.67
CSNK1E-206ENST00000413574 SND1-IT1Q9HBX3 110 aa19.22■□□□□ 0.67
CSNK1E-206ENST00000413574 EPM2AB3EWF7 344 aa19.21■□□□□ 0.67
CSNK1E-206ENST00000413574 SERTAD4-AS1Q5TG53 156 aa19.2■□□□□ 0.66
CSNK1E-206ENST00000413574 LINC00528Q8N1L1 170 aa19.2■□□□□ 0.66
CSNK1E-206ENST00000413574 A0A0J9YXY3 114 aa19.19■□□□□ 0.66
CSNK1E-206ENST00000413574 ZNF815PA8K554 130 aa19.19■□□□□ 0.66
CSNK1E-206ENST00000413574 JOSD1Q15040 202 aaPredicted RBP19.18■□□□□ 0.66
CSNK1E-206ENST00000413574 Q8N1X5 172 aa19.18■□□□□ 0.66
CSNK1E-206ENST00000413574 MIR7-3HGQ8N6C7 128 aa19.18■□□□□ 0.66
CSNK1E-206ENST00000413574 VPS13BQ7Z7G8 4022 aa19.17■□□□□ 0.66
CSNK1E-206ENST00000413574 HSBP1L1C9JCN9 74 aa19.17■□□□□ 0.66
CSNK1E-206ENST00000413574 PCP2Q8IVA1 136 aa19.17■□□□□ 0.66
CSNK1E-206ENST00000413574 PHF5AQ7RTV0 110 aaKnown RBP19.16■□□□□ 0.66
CSNK1E-206ENST00000413574 DAND5Q8N907 189 aa19.16■□□□□ 0.66
CSNK1E-206ENST00000413574 LINC00587B1AMM8 73 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms