RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 NMUP48645 174 aa6.89□□□□□ -1.31
SMARCAL1-204ENST00000412913 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
SMARCAL1-204ENST00000412913 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
SMARCAL1-204ENST00000412913 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
SMARCAL1-204ENST00000412913 PKD1P98161 4303 aa6.89□□□□□ -1.31
SMARCAL1-204ENST00000412913 NDUFA1O15239 70 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 CXCL5P42830 114 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 CFAP161Q6P656 301 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 Q8N814 137 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 C12orf57Q99622 126 aa6.88□□□□□ -1.31
SMARCAL1-204ENST00000412913 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 Q6ZRU5 148 aa6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
SMARCAL1-204ENST00000412913 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 PRSS2P07478 247 aa6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 COX8AP10176 69 aa6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 CNBPP62633 177 aaKnown RBP6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 C6orf226Q5I0X4 101 aa6.86□□□□□ -1.31
SMARCAL1-204ENST00000412913 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 F8WDY8 70 aa6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 S100A12P80511 92 aa6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 CAMK2N2Q96S95 79 aa6.85□□□□□ -1.31
SMARCAL1-204ENST00000412913 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 TRBV30A0A0K0K1B3 111 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 SYCNQ0VAF6 134 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 LITAFQ99732 161 aa6.84□□□□□ -1.31
SMARCAL1-204ENST00000412913 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 DLEU1O43261 78 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 CKS1BP61024 79 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 HERV-K104P63124 156 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 LINC00336Q6ZUF6 198 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 C2orf91Q6ZV80 131 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
SMARCAL1-204ENST00000412913 KRTAP10-2P60368 255 aa6.82□□□□□ -1.32
SMARCAL1-204ENST00000412913 PRO1933Q9H354 126 aa6.82□□□□□ -1.32
SMARCAL1-204ENST00000412913 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
SMARCAL1-204ENST00000412913 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
SMARCAL1-204ENST00000412913 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
SMARCAL1-204ENST00000412913 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
SMARCAL1-204ENST00000412913 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
SMARCAL1-204ENST00000412913 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
SMARCAL1-204ENST00000412913 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
SMARCAL1-204ENST00000412913 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 EREGO14944 169 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 TIMM17BO60830 172 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 MEIG1Q5JSS6 88 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 ADAMTSL4-AS1Q5T5F5 129 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 Q6ZRP5 223 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 UQCR10Q9UDW1 63 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 PKHD1P08F94 4074 aa6.79□□□□□ -1.32
SMARCAL1-204ENST00000412913 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 NDUFC2-KCTD14E9PQ53 114 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 PFN2P35080 140 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 COX17Q14061 63 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 DAND5Q8N907 189 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 SPANXDQ9BXN6 97 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
SMARCAL1-204ENST00000412913 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 SOSTDC1Q6X4U4 206 aa6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 SPANXB1Q9NS25 103 aaPredicted RBP6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
SMARCAL1-204ENST00000412913 A0A096LNI7 61 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
SMARCAL1-204ENST00000412913 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 PANO1I0J062 215 aa6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 LINC00158P58513 81 aa6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 Q8NDZ9 215 aa6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 SND1-IT1Q9HBX3 110 aa6.75□□□□□ -1.33
SMARCAL1-204ENST00000412913 LOC107984156A0A0G2JMH3 177 aa6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 NPC2P61916 151 aa6.74□□□□□ -1.33
SMARCAL1-204ENST00000412913 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms