RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 HIST1H2BCP62807 126 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 HIST2H2BEQ16778 126 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 RNF151Q2KHN1 245 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 HIST1H2BHQ93079 126 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 HIST1H2BNQ99877 126 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 HIST1H2BMQ99879 126 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 C6orf48Q9UBA6 75 aa15.15■□□□□ 0.02
UBE2E3-202ENST00000410062 SPINK8P0C7L1 97 aa15.14■□□□□ 0.01
UBE2E3-202ENST00000410062 Q8IZM0 81 aa15.14■□□□□ 0.01
UBE2E3-202ENST00000410062 GAGE2BQ13066 116 aa15.13■□□□□ 0.01
UBE2E3-202ENST00000410062 C6orf226Q5I0X4 101 aa15.13■□□□□ 0.01
UBE2E3-202ENST00000410062 PCLOQ9Y6V0 5065 aa15.12■□□□□ 0.01
UBE2E3-202ENST00000410062 PTTG1IPP53801 180 aa15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 CKS1BP61024 79 aa15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 RPL18AQ02543 176 aaKnown RBP15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 CHTOPQ9Y3Y2 248 aaKnown RBP15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 LEPROTL1O95214 131 aa15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 LINC00474Q9P2X8 69 aa15.11■□□□□ 0.01
UBE2E3-202ENST00000410062 C11orf86A6NJI1 115 aa15.1■□□□□ 0.01
UBE2E3-202ENST00000410062 H3BRM9 83 aa15.1■□□□□ 0.01
UBE2E3-202ENST00000410062 ZNF22P17026 224 aaPredicted RBP15.1■□□□□ 0.01
UBE2E3-202ENST00000410062 STPG4Q8N801 248 aa15.1■□□□□ 0.01
UBE2E3-202ENST00000410062 SRRM2Q9UQ35 2752 aaKnown RBP15.09■□□□□ 0.01
UBE2E3-202ENST00000410062 TRAV12-1A0A0B4J245 112 aa15.09■□□□□ 0.01
UBE2E3-202ENST00000410062 PLAC8Q9NZF1 115 aa15.09■□□□□ 0.01
UBE2E3-202ENST00000410062 TRBV30A0A0K0K1B3 111 aa15.08■□□□□ 0
UBE2E3-202ENST00000410062 COX7B2Q8TF08 81 aa15.08■□□□□ 0
UBE2E3-202ENST00000410062 VPS13BQ7Z7G8 4022 aa15.08■□□□□ 0
UBE2E3-202ENST00000410062 FABP4P15090 132 aa15.07■□□□□ 0
UBE2E3-202ENST00000410062 C9orf116Q5BN46 136 aaPredicted RBP15.07■□□□□ 0
UBE2E3-202ENST00000410062 H0Y8G0 127 aa15.07■□□□□ 0
UBE2E3-202ENST00000410062 TMEM170BQ5T4T1 132 aa15.06■□□□□ 0
UBE2E3-202ENST00000410062 TLX1NBP0CAT3 122 aa15.05■□□□□ -0
UBE2E3-202ENST00000410062 Q6ZRP5 223 aa15.05■□□□□ -0
UBE2E3-202ENST00000410062 HSPB8Q9UJY1 196 aa15.05■□□□□ -0
UBE2E3-202ENST00000410062 F8VRH5 84 aa15.03■□□□□ -0
UBE2E3-202ENST00000410062 PLA2G1BP04054 148 aaKnown RBP15.03■□□□□ -0
UBE2E3-202ENST00000410062 IGLV5-39A0A0G2JS06 123 aa15.02■□□□□ -0
UBE2E3-202ENST00000410062 CXCL5P42830 114 aa15.02■□□□□ -0
UBE2E3-202ENST00000410062 GAGE2EQ4V326 116 aa15.02■□□□□ -0
UBE2E3-202ENST00000410062 GAGE2DQ9UEU5 116 aa15.02■□□□□ -0
UBE2E3-202ENST00000410062 ODF1Q14990 250 aa15.01□□□□□ -0.01
UBE2E3-202ENST00000410062 A0A1W2PNN7 141 aa15□□□□□ -0.01
UBE2E3-202ENST00000410062 NDUFC2-KCTD14E9PQ53 114 aa15□□□□□ -0.01
UBE2E3-202ENST00000410062 KRTAP10-4P60372 401 aaPredicted RBP14.98□□□□□ -0.01
UBE2E3-202ENST00000410062 RPL37AP61513 92 aaKnown RBP14.98□□□□□ -0.01
UBE2E3-202ENST00000410062 INAFM2P0DMQ5 153 aa14.97□□□□□ -0.01
UBE2E3-202ENST00000410062 LOC105371267A0A1B0GV96 52 aa14.96□□□□□ -0.01
UBE2E3-202ENST00000410062 TMEM223A0PJW6 202 aa14.96□□□□□ -0.01
UBE2E3-202ENST00000410062 FAM168BA1KXE4 195 aa14.95□□□□□ -0.02
UBE2E3-202ENST00000410062 MAP1LC3CQ9BXW4 147 aa14.95□□□□□ -0.02
UBE2E3-202ENST00000410062 COA6Q5JTJ3 125 aaKnown RBP14.94□□□□□ -0.02
UBE2E3-202ENST00000410062 C7orf33Q8WU49 177 aa14.94□□□□□ -0.02
UBE2E3-202ENST00000410062 PMCHL2Q9BQD1 86 aa14.94□□□□□ -0.02
UBE2E3-202ENST00000410062 C9orf129Q5T035 196 aaKnown RBP14.93□□□□□ -0.02
UBE2E3-202ENST00000410062 PLNP26678 52 aa14.9□□□□□ -0.02
UBE2E3-202ENST00000410062 FAM19A5Q7Z5A7 132 aaPredicted RBP14.9□□□□□ -0.02
UBE2E3-202ENST00000410062 XAGE1AQ9HD64 81 aa14.9□□□□□ -0.02
UBE2E3-202ENST00000410062 DPM2O94777 84 aa14.9□□□□□ -0.02
UBE2E3-202ENST00000410062 CTAG1AP78358 180 aa14.9□□□□□ -0.02
UBE2E3-202ENST00000410062 PHF5AQ7RTV0 110 aaKnown RBP14.89□□□□□ -0.03
UBE2E3-202ENST00000410062 KRTAP7-1Q8IUC3 87 aa14.88□□□□□ -0.03
UBE2E3-202ENST00000410062 ZNF625Q96I27 306 aaPredicted RBP14.88□□□□□ -0.03
UBE2E3-202ENST00000410062 SYS1-DBNDD2H3BUS1 97 aa14.87□□□□□ -0.03
UBE2E3-202ENST00000410062 TMA7Q9Y2S6 64 aaKnown RBP14.87□□□□□ -0.03
UBE2E3-202ENST00000410062 FLG2Q5D862 2391 aaPredicted RBP14.87□□□□□ -0.03
UBE2E3-202ENST00000410062 IGKCP01834 107 aa14.86□□□□□ -0.03
UBE2E3-202ENST00000410062 PFN2P35080 140 aa14.85□□□□□ -0.03
UBE2E3-202ENST00000410062 MYCBP2O75592 4640 aa14.85□□□□□ -0.03
UBE2E3-202ENST00000410062 HNRNPA3P51991 378 aaKnown RBP14.84□□□□□ -0.03
UBE2E3-202ENST00000410062 ERG28Q9UKR5 140 aa14.84□□□□□ -0.03
UBE2E3-202ENST00000410062 SFTA2Q6UW10 78 aa14.83□□□□□ -0.04
UBE2E3-202ENST00000410062 PRR3P79522 188 aaKnown RBP14.82□□□□□ -0.04
UBE2E3-202ENST00000410062 SERTAD4-AS1Q5TG53 156 aa14.82□□□□□ -0.04
UBE2E3-202ENST00000410062 M0QXV9 152 aa14.81□□□□□ -0.04
UBE2E3-202ENST00000410062 C3orf79P0CE67 100 aa14.81□□□□□ -0.04
UBE2E3-202ENST00000410062 PET117Q6UWS5 81 aa14.81□□□□□ -0.04
UBE2E3-202ENST00000410062 TSPEAR-AS2P59090 65 aa14.8□□□□□ -0.04
UBE2E3-202ENST00000410062 LINC01545Q5VT33 79 aa14.8□□□□□ -0.04
UBE2E3-202ENST00000410062 LEPROTO15243 131 aa14.79□□□□□ -0.04
UBE2E3-202ENST00000410062 KRTDAPP60985 99 aa14.79□□□□□ -0.04
UBE2E3-202ENST00000410062 HERVK_113P61574 105 aa14.79□□□□□ -0.04
UBE2E3-202ENST00000410062 COX17Q14061 63 aa14.78□□□□□ -0.04
UBE2E3-202ENST00000410062 NDUFA12Q9UI09 145 aa14.77□□□□□ -0.04
UBE2E3-202ENST00000410062 PKHD1L1Q86WI1 4243 aa14.77□□□□□ -0.04
UBE2E3-202ENST00000410062 KRTAP11-1Q8IUC1 163 aa14.77□□□□□ -0.05
UBE2E3-202ENST00000410062 PLEKHB2Q96CS7 222 aa14.77□□□□□ -0.05
UBE2E3-202ENST00000410062 PSORS1C2Q9UIG4 136 aa14.77□□□□□ -0.05
UBE2E3-202ENST00000410062 SND1-IT1Q9HBX3 110 aa14.76□□□□□ -0.05
UBE2E3-202ENST00000410062 C22orf24Q9Y442 160 aa14.76□□□□□ -0.05
UBE2E3-202ENST00000410062 A0A0U1RRA0 63 aa14.75□□□□□ -0.05
UBE2E3-202ENST00000410062 J3QQQ9 107 aa14.75□□□□□ -0.05
UBE2E3-202ENST00000410062 LINC00158P58513 81 aa14.75□□□□□ -0.05
UBE2E3-202ENST00000410062 MYMXA0A1B0GTQ4 84 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 HERV-K104P63124 156 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 UBE2BP63146 152 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 HIST3H2BBQ8N257 126 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 SMIM13P0DJ93 91 aa14.73□□□□□ -0.05
UBE2E3-202ENST00000410062 MEIG1Q5JSS6 88 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms