RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 Q6ZRU5 148 aa10.75□□□□□ -0.69
SUMO1-208ENST00000409627 CKS1BP61024 79 aa10.74□□□□□ -0.69
SUMO1-208ENST00000409627 HERVK_113P61574 105 aa10.73□□□□□ -0.69
SUMO1-208ENST00000409627 RNF151Q2KHN1 245 aa10.73□□□□□ -0.69
SUMO1-208ENST00000409627 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
SUMO1-208ENST00000409627 UNQ6190/PRO20217Q6UXQ8 127 aa10.73□□□□□ -0.69
SUMO1-208ENST00000409627 LINC01620Q4KN68 170 aa10.72□□□□□ -0.69
SUMO1-208ENST00000409627 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
SUMO1-208ENST00000409627 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
SUMO1-208ENST00000409627 KRTAP10-1P60331 282 aa10.71□□□□□ -0.69
SUMO1-208ENST00000409627 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.69
SUMO1-208ENST00000409627 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
SUMO1-208ENST00000409627 PKHD1P08F94 4074 aa10.7□□□□□ -0.7
SUMO1-208ENST00000409627 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
SUMO1-208ENST00000409627 DYNC1H1Q14204 4646 aaKnown RBP10.69□□□□□ -0.7
SUMO1-208ENST00000409627 LEPROTO15243 131 aa10.69□□□□□ -0.7
SUMO1-208ENST00000409627 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
SUMO1-208ENST00000409627 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
SUMO1-208ENST00000409627 E9PLD3 99 aa10.68□□□□□ -0.7
SUMO1-208ENST00000409627 LOC107984640A0A0U1RRK4 108 aa10.67□□□□□ -0.7
SUMO1-208ENST00000409627 TLX1NBP0CAT3 122 aa10.66□□□□□ -0.7
SUMO1-208ENST00000409627 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
SUMO1-208ENST00000409627 Q6ZSA8 131 aa10.66□□□□□ -0.7
SUMO1-208ENST00000409627 ATOH7Q8N100 152 aa10.66□□□□□ -0.7
SUMO1-208ENST00000409627 STPG4Q8N801 248 aa10.66□□□□□ -0.7
SUMO1-208ENST00000409627 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
SUMO1-208ENST00000409627 J3QQQ9 107 aa10.65□□□□□ -0.7
SUMO1-208ENST00000409627 SCGB1D1O95968 90 aa10.65□□□□□ -0.7
SUMO1-208ENST00000409627 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
SUMO1-208ENST00000409627 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
SUMO1-208ENST00000409627 A0A096LNI7 61 aa10.63□□□□□ -0.71
SUMO1-208ENST00000409627 LGALS3P17931 250 aaKnown RBP10.63□□□□□ -0.71
SUMO1-208ENST00000409627 NMUP48645 174 aa10.63□□□□□ -0.71
SUMO1-208ENST00000409627 NDUFA12Q9UI09 145 aa10.63□□□□□ -0.71
SUMO1-208ENST00000409627 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
SUMO1-208ENST00000409627 NDUFC2-KCTD14E9PQ53 114 aa10.62□□□□□ -0.71
SUMO1-208ENST00000409627 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
SUMO1-208ENST00000409627 HERV-K104P63124 156 aa10.62□□□□□ -0.71
SUMO1-208ENST00000409627 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
SUMO1-208ENST00000409627 CIRBPQ14011 172 aaKnown RBP10.62□□□□□ -0.71
SUMO1-208ENST00000409627 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
SUMO1-208ENST00000409627 FAM30AQ9NZY2 134 aa10.62□□□□□ -0.71
SUMO1-208ENST00000409627 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
SUMO1-208ENST00000409627 Q6ZRP5 223 aa10.61□□□□□ -0.71
SUMO1-208ENST00000409627 LINC00474Q9P2X8 69 aa10.61□□□□□ -0.71
SUMO1-208ENST00000409627 ERG28Q9UKR5 140 aa10.61□□□□□ -0.71
SUMO1-208ENST00000409627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.61□□□□□ -0.71
SUMO1-208ENST00000409627 DNAH8Q96JB1 4490 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 IGKV2D-26A0A0A0MRZ7 120 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 IGKV2-24A0A0C4DH68 120 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 PANO1I0J062 215 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 COX17Q14061 63 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 SPACA4Q8TDM5 124 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
SUMO1-208ENST00000409627 HSBP1L1C9JCN9 74 aa10.59□□□□□ -0.71
SUMO1-208ENST00000409627 CDK2AP2O75956 126 aa10.58□□□□□ -0.72
SUMO1-208ENST00000409627 MAJINQ3KP22 176 aa10.58□□□□□ -0.72
SUMO1-208ENST00000409627 LINC00587B1AMM8 73 aa10.57□□□□□ -0.72
SUMO1-208ENST00000409627 PFN2P35080 140 aa10.57□□□□□ -0.72
SUMO1-208ENST00000409627 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
SUMO1-208ENST00000409627 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
SUMO1-208ENST00000409627 XGP55808 180 aa10.56□□□□□ -0.72
SUMO1-208ENST00000409627 MEIG1Q5JSS6 88 aa10.56□□□□□ -0.72
SUMO1-208ENST00000409627 ZNF815PA8K554 130 aa10.55□□□□□ -0.72
SUMO1-208ENST00000409627 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
SUMO1-208ENST00000409627 SCXQ7RTU7 201 aa10.55□□□□□ -0.72
SUMO1-208ENST00000409627 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
SUMO1-208ENST00000409627 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
SUMO1-208ENST00000409627 A0A087WYN8 130 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 LINC00158P58513 81 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
SUMO1-208ENST00000409627 DPH3Q96FX2 82 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 PLAC8Q9NZF1 115 aa10.53□□□□□ -0.72
SUMO1-208ENST00000409627 APOBP04114 4563 aaKnown RBP10.53□□□□□ -0.72
SUMO1-208ENST00000409627 HAMPP81172 84 aa10.52□□□□□ -0.73
SUMO1-208ENST00000409627 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.73
SUMO1-208ENST00000409627 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
SUMO1-208ENST00000409627 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
SUMO1-208ENST00000409627 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
SUMO1-208ENST00000409627 VAMP8Q9BV40 100 aa10.51□□□□□ -0.73
SUMO1-208ENST00000409627 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
SUMO1-208ENST00000409627 RYR1P21817 5038 aa10.5□□□□□ -0.73
SUMO1-208ENST00000409627 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
SUMO1-208ENST00000409627 TIMM17BO60830 172 aa10.49□□□□□ -0.73
SUMO1-208ENST00000409627 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
SUMO1-208ENST00000409627 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
SUMO1-208ENST00000409627 SPATA45Q537H7 98 aa10.48□□□□□ -0.73
SUMO1-208ENST00000409627 PAM16Q9Y3D7 125 aa10.48□□□□□ -0.73
SUMO1-208ENST00000409627 FAM168BA1KXE4 195 aa10.47□□□□□ -0.73
SUMO1-208ENST00000409627 SCGB1D4Q6XE38 83 aa10.47□□□□□ -0.73
SUMO1-208ENST00000409627 LITAFQ99732 161 aa10.47□□□□□ -0.73
SUMO1-208ENST00000409627 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
SUMO1-208ENST00000409627 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.73
SUMO1-208ENST00000409627 LOC105371267A0A1B0GV96 52 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 COX8AP10176 69 aa10.45□□□□□ -0.74
SUMO1-208ENST00000409627 ADAMTSL4-AS1Q5T5F5 129 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms