RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 YPEL4Q96NS1 127 aa9.97□□□□□ -0.81
ITGA6-202ENST00000409080 Q6ZSN1 163 aa9.96□□□□□ -0.81
ITGA6-202ENST00000409080 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.81
ITGA6-202ENST00000409080 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.81
ITGA6-202ENST00000409080 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.81
ITGA6-202ENST00000409080 Q6JHZ5 121 aa9.96□□□□□ -0.82
ITGA6-202ENST00000409080 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
ITGA6-202ENST00000409080 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
ITGA6-202ENST00000409080 ESRGQ1W209 222 aa9.94□□□□□ -0.82
ITGA6-202ENST00000409080 C9orf116Q5BN46 136 aaPredicted RBP9.94□□□□□ -0.82
ITGA6-202ENST00000409080 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
ITGA6-202ENST00000409080 NDUFV3P56181 108 aaKnown RBP9.93□□□□□ -0.82
ITGA6-202ENST00000409080 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
ITGA6-202ENST00000409080 X6R8D5 127 aa9.93□□□□□ -0.82
ITGA6-202ENST00000409080 NDUFC2O95298 119 aa9.93□□□□□ -0.82
ITGA6-202ENST00000409080 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
ITGA6-202ENST00000409080 LST1O00453 97 aa9.92□□□□□ -0.82
ITGA6-202ENST00000409080 PCSK5Q92824 1860 aa9.91□□□□□ -0.82
ITGA6-202ENST00000409080 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
ITGA6-202ENST00000409080 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
ITGA6-202ENST00000409080 MTORP42345 2549 aa9.9□□□□□ -0.82
ITGA6-202ENST00000409080 NBDYA0A0U1RRE5 68 aa9.9□□□□□ -0.83
ITGA6-202ENST00000409080 Q6ZRU5 148 aa9.89□□□□□ -0.83
ITGA6-202ENST00000409080 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
ITGA6-202ENST00000409080 KLK9Q2XQG4 91 aa9.89□□□□□ -0.83
ITGA6-202ENST00000409080 COL27A1Q8IZC6 1860 aaPredicted RBP9.89□□□□□ -0.83
ITGA6-202ENST00000409080 SETD2Q9BYW2 2564 aaPredicted RBP9.88□□□□□ -0.83
ITGA6-202ENST00000409080 F8P00451 2351 aa9.88□□□□□ -0.83
ITGA6-202ENST00000409080 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
ITGA6-202ENST00000409080 KIF25-AS1Q9Y6Z4 181 aa9.87□□□□□ -0.83
ITGA6-202ENST00000409080 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
ITGA6-202ENST00000409080 Q8NAQ8 132 aa9.87□□□□□ -0.83
ITGA6-202ENST00000409080 AGRNO00468 2067 aa9.87□□□□□ -0.83
ITGA6-202ENST00000409080 A0A096LNT2 108 aa9.86□□□□□ -0.83
ITGA6-202ENST00000409080 Q9BRP9 147 aa9.86□□□□□ -0.83
ITGA6-202ENST00000409080 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
ITGA6-202ENST00000409080 LINC00315P59091 139 aa9.84□□□□□ -0.83
ITGA6-202ENST00000409080 Q8N814 137 aa9.84□□□□□ -0.83
ITGA6-202ENST00000409080 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
ITGA6-202ENST00000409080 NTM-AS1Q6ZSK4 140 aa9.83□□□□□ -0.84
ITGA6-202ENST00000409080 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
ITGA6-202ENST00000409080 POLQO75417 2590 aa9.83□□□□□ -0.84
ITGA6-202ENST00000409080 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
ITGA6-202ENST00000409080 SDIM1Q6ZPB5 146 aa9.82□□□□□ -0.84
ITGA6-202ENST00000409080 C2orf91Q6ZV80 131 aa9.81□□□□□ -0.84
ITGA6-202ENST00000409080 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
ITGA6-202ENST00000409080 ACANP16112 2415 aa9.8□□□□□ -0.84
ITGA6-202ENST00000409080 RTL8CO15255 209 aa9.8□□□□□ -0.84
ITGA6-202ENST00000409080 J3KT08 172 aa9.8□□□□□ -0.84
ITGA6-202ENST00000409080 K7EIL1 84 aa9.79□□□□□ -0.84
ITGA6-202ENST00000409080 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
ITGA6-202ENST00000409080 PRR3P79522 188 aaKnown RBP9.78□□□□□ -0.84
ITGA6-202ENST00000409080 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
ITGA6-202ENST00000409080 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
ITGA6-202ENST00000409080 SPTSSBQ8NFR3 76 aa9.78□□□□□ -0.84
ITGA6-202ENST00000409080 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
ITGA6-202ENST00000409080 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
ITGA6-202ENST00000409080 FAM19A3Q7Z5A8 133 aa9.76□□□□□ -0.85
ITGA6-202ENST00000409080 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
ITGA6-202ENST00000409080 Q8N9L7 120 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 K7ERS5 55 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 PRLHP81277 87 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 C19orf73Q9NVV2 129 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 Q6ZRP5 223 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 B5MCH6 92 aa9.75□□□□□ -0.85
ITGA6-202ENST00000409080 ADAMTSL4-AS1Q5T5F5 129 aa9.74□□□□□ -0.85
ITGA6-202ENST00000409080 FLNBO75369 2602 aaKnown RBP9.74□□□□□ -0.85
ITGA6-202ENST00000409080 CENPFP49454 3210 aa9.74□□□□□ -0.85
ITGA6-202ENST00000409080 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
ITGA6-202ENST00000409080 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
ITGA6-202ENST00000409080 KRTAP10-11P60412 298 aa9.73□□□□□ -0.85
ITGA6-202ENST00000409080 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
ITGA6-202ENST00000409080 PRR15LQ9BU68 103 aa9.73□□□□□ -0.85
ITGA6-202ENST00000409080 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
ITGA6-202ENST00000409080 A0A096LNJ9 63 aa9.72□□□□□ -0.85
ITGA6-202ENST00000409080 IMUPQ9GZP8 106 aa9.72□□□□□ -0.85
ITGA6-202ENST00000409080 LINC00310P59036 64 aa9.71□□□□□ -0.85
ITGA6-202ENST00000409080 LINC00575Q6W349 94 aa9.71□□□□□ -0.85
ITGA6-202ENST00000409080 Q6ZVQ6 151 aa9.71□□□□□ -0.85
ITGA6-202ENST00000409080 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
ITGA6-202ENST00000409080 XGP55808 180 aa9.71□□□□□ -0.86
ITGA6-202ENST00000409080 KRTAP1-3Q8IUG1 177 aa9.71□□□□□ -0.86
ITGA6-202ENST00000409080 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
ITGA6-202ENST00000409080 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
ITGA6-202ENST00000409080 NDUFC1O43677 76 aa9.7□□□□□ -0.86
ITGA6-202ENST00000409080 A0A087WSZ3 146 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 FAM236DA0A1B0GTK5 79 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 FAM236CP0DP71 79 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 A0A087WYN8 130 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 SRCAPQ6ZRS2 3230 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 CRYGAP11844 174 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 GVQW2A0A096LPI5 108 aaPredicted RBP9.69□□□□□ -0.86
ITGA6-202ENST00000409080 UQCRQO14949 82 aa9.69□□□□□ -0.86
ITGA6-202ENST00000409080 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
ITGA6-202ENST00000409080 A8MTW9 85 aa9.66□□□□□ -0.86
ITGA6-202ENST00000409080 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
ITGA6-202ENST00000409080 J3QL48 77 aa9.66□□□□□ -0.86
ITGA6-202ENST00000409080 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms