RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
NR1H3-204ENST00000407404 H3BRM9 83 aa10.58□□□□□ -0.72
NR1H3-204ENST00000407404 SERF1AO75920 110 aa10.58□□□□□ -0.72
NR1H3-204ENST00000407404 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
NR1H3-204ENST00000407404 IFI27L1Q96BM0 104 aa10.58□□□□□ -0.72
NR1H3-204ENST00000407404 DNAH8Q96JB1 4490 aa10.57□□□□□ -0.72
NR1H3-204ENST00000407404 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
NR1H3-204ENST00000407404 TLX1NBP0CAT3 122 aa10.56□□□□□ -0.72
NR1H3-204ENST00000407404 LINC00310P59036 64 aa10.56□□□□□ -0.72
NR1H3-204ENST00000407404 CXCL5P42830 114 aa10.55□□□□□ -0.72
NR1H3-204ENST00000407404 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
NR1H3-204ENST00000407404 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
NR1H3-204ENST00000407404 CHTOPQ9Y3Y2 248 aaKnown RBP10.55□□□□□ -0.72
NR1H3-204ENST00000407404 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
NR1H3-204ENST00000407404 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 F8VRH5 84 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 NUPR1O60356 82 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 Q6ZRP5 223 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 C7orf33Q8WU49 177 aa10.53□□□□□ -0.72
NR1H3-204ENST00000407404 C11orf86A6NJI1 115 aa10.52□□□□□ -0.73
NR1H3-204ENST00000407404 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
NR1H3-204ENST00000407404 GAGE2EQ4V326 116 aa10.52□□□□□ -0.73
NR1H3-204ENST00000407404 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
NR1H3-204ENST00000407404 GAGE2DQ9UEU5 116 aa10.52□□□□□ -0.73
NR1H3-204ENST00000407404 NDUFC2-KCTD14E9PQ53 114 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
NR1H3-204ENST00000407404 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
NR1H3-204ENST00000407404 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
NR1H3-204ENST00000407404 HSPB8Q9UJY1 196 aa10.5□□□□□ -0.73
NR1H3-204ENST00000407404 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
NR1H3-204ENST00000407404 FABP4P15090 132 aa10.48□□□□□ -0.73
NR1H3-204ENST00000407404 H0Y8G0 127 aa10.47□□□□□ -0.73
NR1H3-204ENST00000407404 ODF1Q14990 250 aa10.45□□□□□ -0.74
NR1H3-204ENST00000407404 FAM168BA1KXE4 195 aa10.44□□□□□ -0.74
NR1H3-204ENST00000407404 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
NR1H3-204ENST00000407404 FAT1Q14517 4588 aa10.44□□□□□ -0.74
NR1H3-204ENST00000407404 TMEM223A0PJW6 202 aa10.43□□□□□ -0.74
NR1H3-204ENST00000407404 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
NR1H3-204ENST00000407404 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
NR1H3-204ENST00000407404 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
NR1H3-204ENST00000407404 SRRM2Q9UQ35 2752 aaKnown RBP10.41□□□□□ -0.74
NR1H3-204ENST00000407404 PRR3P79522 188 aaKnown RBP10.41□□□□□ -0.74
NR1H3-204ENST00000407404 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
NR1H3-204ENST00000407404 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
NR1H3-204ENST00000407404 ABCA13Q86UQ4 5058 aa10.41□□□□□ -0.74
NR1H3-204ENST00000407404 PLNP26678 52 aa10.4□□□□□ -0.74
NR1H3-204ENST00000407404 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.74
NR1H3-204ENST00000407404 PCLOQ9Y6V0 5065 aa10.4□□□□□ -0.74
NR1H3-204ENST00000407404 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
NR1H3-204ENST00000407404 KRTAP7-1Q8IUC3 87 aa10.39□□□□□ -0.75
NR1H3-204ENST00000407404 VPS13BQ7Z7G8 4022 aa10.39□□□□□ -0.75
NR1H3-204ENST00000407404 M0QXV9 152 aa10.38□□□□□ -0.75
NR1H3-204ENST00000407404 DPM2O94777 84 aa10.38□□□□□ -0.75
NR1H3-204ENST00000407404 PFN2P35080 140 aa10.38□□□□□ -0.75
NR1H3-204ENST00000407404 ZNF625Q96I27 306 aaPredicted RBP10.37□□□□□ -0.75
NR1H3-204ENST00000407404 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
NR1H3-204ENST00000407404 IGKCP01834 107 aa10.36□□□□□ -0.75
NR1H3-204ENST00000407404 COX17Q14061 63 aa10.36□□□□□ -0.75
NR1H3-204ENST00000407404 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
NR1H3-204ENST00000407404 SYS1-DBNDD2H3BUS1 97 aa10.35□□□□□ -0.75
NR1H3-204ENST00000407404 S100A6P06703 90 aa10.35□□□□□ -0.75
NR1H3-204ENST00000407404 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
NR1H3-204ENST00000407404 PSORS1C2Q9UIG4 136 aa10.35□□□□□ -0.75
NR1H3-204ENST00000407404 HERVK_113P61574 105 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 UBE2BP63146 152 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 PLA2G2DQ9UNK4 145 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 C22orf24Q9Y442 160 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
NR1H3-204ENST00000407404 LEPROTO15243 131 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 C1orf137Q5JT78 98 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 PLEKHB2Q96CS7 222 aa10.33□□□□□ -0.76
NR1H3-204ENST00000407404 TMA7Q9Y2S6 64 aaKnown RBP10.33□□□□□ -0.76
NR1H3-204ENST00000407404 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
NR1H3-204ENST00000407404 HERV-K104P63124 156 aa10.32□□□□□ -0.76
NR1H3-204ENST00000407404 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
NR1H3-204ENST00000407404 PET117Q6UWS5 81 aa10.32□□□□□ -0.76
NR1H3-204ENST00000407404 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
NR1H3-204ENST00000407404 TP73-AS1Q9UF72 201 aa10.32□□□□□ -0.76
NR1H3-204ENST00000407404 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
NR1H3-204ENST00000407404 MYMXA0A1B0GTQ4 84 aa10.31□□□□□ -0.76
NR1H3-204ENST00000407404 OXTP01178 125 aa10.31□□□□□ -0.76
NR1H3-204ENST00000407404 LINC00158P58513 81 aa10.31□□□□□ -0.76
NR1H3-204ENST00000407404 LINC01545Q5VT33 79 aa10.31□□□□□ -0.76
NR1H3-204ENST00000407404 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
NR1H3-204ENST00000407404 J3QL48 77 aa10.3□□□□□ -0.76
NR1H3-204ENST00000407404 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
NR1H3-204ENST00000407404 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
NR1H3-204ENST00000407404 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
NR1H3-204ENST00000407404 MRPL55Q7Z7F7 128 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms