RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CELA1Q9UNI1 258 aa11.61□□□□□ -0.55
NUP50-203ENST00000407019 A0A1B0GV72 72 aa11.6□□□□□ -0.55
NUP50-203ENST00000407019 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
NUP50-203ENST00000407019 FAM218AQ96MZ4 157 aa11.6□□□□□ -0.55
NUP50-203ENST00000407019 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
NUP50-203ENST00000407019 TRAV26-1A0A087WT03 109 aa11.59□□□□□ -0.55
NUP50-203ENST00000407019 FN1P02751 2386 aaKnown RBP11.59□□□□□ -0.55
NUP50-203ENST00000407019 HECTD1Q9ULT8 2610 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 GCN1Q92616 2671 aaKnown RBP11.58□□□□□ -0.56
NUP50-203ENST00000407019 FAM240AA0A1B0GVK7 77 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 SNCGO76070 127 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
NUP50-203ENST00000407019 CKS1BP61024 79 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
NUP50-203ENST00000407019 SPART-AS1P0CW21 52 aa11.57□□□□□ -0.56
NUP50-203ENST00000407019 WFDC9Q8NEX5 89 aa11.57□□□□□ -0.56
NUP50-203ENST00000407019 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
NUP50-203ENST00000407019 REG3AQ06141 175 aa11.56□□□□□ -0.56
NUP50-203ENST00000407019 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
NUP50-203ENST00000407019 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
NUP50-203ENST00000407019 Q8N3U1 123 aa11.56□□□□□ -0.56
NUP50-203ENST00000407019 WIPF1O43516 503 aa11.55□□□□□ -0.56
NUP50-203ENST00000407019 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
NUP50-203ENST00000407019 VWFP04275 2813 aa11.55□□□□□ -0.56
NUP50-203ENST00000407019 HTN3P15516 51 aa11.55□□□□□ -0.56
NUP50-203ENST00000407019 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
NUP50-203ENST00000407019 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
NUP50-203ENST00000407019 CXCL5P42830 114 aa11.54□□□□□ -0.56
NUP50-203ENST00000407019 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
NUP50-203ENST00000407019 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
NUP50-203ENST00000407019 H0YGX0 51 aa11.53□□□□□ -0.56
NUP50-203ENST00000407019 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
NUP50-203ENST00000407019 MALP21145 153 aa11.53□□□□□ -0.56
NUP50-203ENST00000407019 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
NUP50-203ENST00000407019 Q9HAA7 133 aa11.53□□□□□ -0.56
NUP50-203ENST00000407019 LELP1Q5T871 98 aa11.52□□□□□ -0.57
NUP50-203ENST00000407019 GAGE2BQ13066 116 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 A0A087WYN8 130 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 DNAL4O96015 105 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
NUP50-203ENST00000407019 NOTCH2Q04721 2471 aa11.5□□□□□ -0.57
NUP50-203ENST00000407019 COX17Q14061 63 aa11.5□□□□□ -0.57
NUP50-203ENST00000407019 ACYP1P07311 99 aa11.49□□□□□ -0.57
NUP50-203ENST00000407019 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
NUP50-203ENST00000407019 Q6Q795 121 aa11.48□□□□□ -0.57
NUP50-203ENST00000407019 TENM1Q9UKZ4 2725 aa11.47□□□□□ -0.57
NUP50-203ENST00000407019 NDUFC2O95298 119 aa11.46□□□□□ -0.57
NUP50-203ENST00000407019 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.57
NUP50-203ENST00000407019 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
NUP50-203ENST00000407019 LECT2O14960 151 aa11.45□□□□□ -0.58
NUP50-203ENST00000407019 ANAPC13Q9BS18 74 aa11.45□□□□□ -0.58
NUP50-203ENST00000407019 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
NUP50-203ENST00000407019 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
NUP50-203ENST00000407019 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
NUP50-203ENST00000407019 KLK12Q9UKR0 248 aa11.44□□□□□ -0.58
NUP50-203ENST00000407019 HIVEP1P15822 2718 aa11.43□□□□□ -0.58
NUP50-203ENST00000407019 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
NUP50-203ENST00000407019 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
NUP50-203ENST00000407019 NANOS2P60321 138 aaKnown RBP11.42□□□□□ -0.58
NUP50-203ENST00000407019 OXLD1Q5BKU9 147 aa11.41□□□□□ -0.58
NUP50-203ENST00000407019 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
NUP50-203ENST00000407019 NDUFV3P56181 108 aaKnown RBP11.4□□□□□ -0.58
NUP50-203ENST00000407019 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 C6orf223Q8N319 242 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 C10orf25Q5T742 122 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 RETNQ9HD89 108 aa11.4□□□□□ -0.58
NUP50-203ENST00000407019 TRBV7-7A0A0K0K1E9 115 aa11.39□□□□□ -0.59
NUP50-203ENST00000407019 TEP1Q99973 2627 aaKnown RBP11.39□□□□□ -0.59
NUP50-203ENST00000407019 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
NUP50-203ENST00000407019 ATRQ13535 2644 aa11.39□□□□□ -0.59
NUP50-203ENST00000407019 GAGE2AQ6NT46 116 aa11.39□□□□□ -0.59
NUP50-203ENST00000407019 SMCR5Q8TEV8 140 aa11.39□□□□□ -0.59
NUP50-203ENST00000407019 NCR3O14931 201 aa11.38□□□□□ -0.59
NUP50-203ENST00000407019 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
NUP50-203ENST00000407019 A0A0J9YWU9 116 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 A0A1B0GX51 115 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 CYSRT1A8MQ03 144 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 H3BNG1 76 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 SLPIP03973 132 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
NUP50-203ENST00000407019 Q8NDZ9 215 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 OBSCN-AS1Q96MR7 158 aa11.37□□□□□ -0.59
NUP50-203ENST00000407019 KPRPQ5T749 579 aaPredicted RBP11.36□□□□□ -0.59
NUP50-203ENST00000407019 SDIM1Q6ZPB5 146 aa11.36□□□□□ -0.59
NUP50-203ENST00000407019 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
NUP50-203ENST00000407019 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
NUP50-203ENST00000407019 C14orf132Q9NPU4 83 aa11.35□□□□□ -0.59
NUP50-203ENST00000407019 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
NUP50-203ENST00000407019 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
NUP50-203ENST00000407019 Q6ZTC4 211 aa11.34□□□□□ -0.59
NUP50-203ENST00000407019 WFDC10BQ8IUB3 73 aa11.34□□□□□ -0.59
NUP50-203ENST00000407019 Q8N814 137 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms