RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
GPC3-203ENST00000406757 NFE4Q86UQ8 179 aa5.52□□□□□ -1.53
GPC3-203ENST00000406757 STPG4Q8N801 248 aa5.52□□□□□ -1.53
GPC3-203ENST00000406757 RMI2Q96E14 147 aa5.52□□□□□ -1.53
GPC3-203ENST00000406757 LINC00526Q96FQ7 95 aa5.52□□□□□ -1.53
GPC3-203ENST00000406757 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 C20orf202A1L168 122 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 COX7A2LO14548 114 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 MALP21145 153 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 HIGD2BQ4VC39 106 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
GPC3-203ENST00000406757 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
GPC3-203ENST00000406757 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 CDK2AP2O75956 126 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 FUSP35637 526 aaKnown RBP eCLIP5.5□□□□□ -1.53
GPC3-203ENST00000406757 SEC11AP67812 179 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 JOSD1Q15040 202 aaPredicted RBP5.5□□□□□ -1.53
GPC3-203ENST00000406757 PYY3Q5JQD4 70 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 TOMM7Q9P0U1 55 aa5.5□□□□□ -1.53
GPC3-203ENST00000406757 HERC1Q15751 4861 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 IGLV5-45A0A087WSX0 123 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 A0A087WZ39 114 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 PLNP26678 52 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 C15orf56Q8N910 161 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 ORAOV1Q8WV07 137 aa5.49□□□□□ -1.53
GPC3-203ENST00000406757 LRCOL1A6NCL2 159 aa5.48□□□□□ -1.53
GPC3-203ENST00000406757 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
GPC3-203ENST00000406757 H3BRM9 83 aa5.48□□□□□ -1.53
GPC3-203ENST00000406757 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
GPC3-203ENST00000406757 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
GPC3-203ENST00000406757 IGKV2D-26A0A0A0MRZ7 120 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 IGHV1-58A0A0C4DH39 117 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 TSPEAR-AS2P59090 65 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 SPAG11BQ08648 103 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 Q8N1X5 172 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
GPC3-203ENST00000406757 A0A087WTM6 91 aa5.46□□□□□ -1.54
GPC3-203ENST00000406757 APOMO95445 188 aa5.46□□□□□ -1.54
GPC3-203ENST00000406757 KIAA0087Q14695 138 aa5.46□□□□□ -1.54
GPC3-203ENST00000406757 COX7B2Q8TF08 81 aa5.46□□□□□ -1.54
GPC3-203ENST00000406757 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 ZNF561-AS1K7EIQ3 104 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 LEPROTO15243 131 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 SLPIP03973 132 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 PRSS2P07478 247 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 NMUP48645 174 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 HERVK_113P61574 105 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 C6orf226Q5I0X4 101 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 UNQ6190/PRO20217Q6UXQ8 127 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
GPC3-203ENST00000406757 TP73-AS1Q9UF72 201 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 PAM16Q9Y3D7 125 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 FAT1Q14517 4588 aa5.45□□□□□ -1.54
GPC3-203ENST00000406757 GVQW2A0A096LPI5 108 aaPredicted RBP5.44□□□□□ -1.54
GPC3-203ENST00000406757 HSBP1L1C9JCN9 74 aa5.44□□□□□ -1.54
GPC3-203ENST00000406757 E9PLD3 99 aa5.44□□□□□ -1.54
GPC3-203ENST00000406757 J3QQQ9 107 aa5.44□□□□□ -1.54
GPC3-203ENST00000406757 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
GPC3-203ENST00000406757 PCP2Q8IVA1 136 aa5.44□□□□□ -1.54
GPC3-203ENST00000406757 NTN5Q8WTR8 489 aaPredicted RBP5.44□□□□□ -1.54
GPC3-203ENST00000406757 LGALS3P17931 250 aaKnown RBP5.43□□□□□ -1.54
GPC3-203ENST00000406757 CKS1BP61024 79 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 LINC01620Q4KN68 170 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
GPC3-203ENST00000406757 Q6ZRU5 148 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 Q8IZM0 81 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 Q8N814 137 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 PLEKHB2Q96CS7 222 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 CAMK2N2Q96S95 79 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 VAMP8Q9BV40 100 aa5.43□□□□□ -1.54
GPC3-203ENST00000406757 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
GPC3-203ENST00000406757 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
GPC3-203ENST00000406757 SYCNQ0VAF6 134 aa5.41□□□□□ -1.54
GPC3-203ENST00000406757 C14orf177Q52M58 125 aa5.41□□□□□ -1.54
GPC3-203ENST00000406757 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
GPC3-203ENST00000406757 C6orf48Q9UBA6 75 aa5.41□□□□□ -1.54
GPC3-203ENST00000406757 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
GPC3-203ENST00000406757 ZNF815PA8K554 130 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 NDUFA1O15239 70 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 PFN2P35080 140 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 CARD19Q96LW7 228 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 C12orf57Q99622 126 aa5.4□□□□□ -1.54
GPC3-203ENST00000406757 MYMXA0A1B0GTQ4 84 aa5.39□□□□□ -1.55
GPC3-203ENST00000406757 SMIM6P0DI80 62 aa5.39□□□□□ -1.55
GPC3-203ENST00000406757 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
GPC3-203ENST00000406757 S100A12P80511 92 aa5.39□□□□□ -1.55
GPC3-203ENST00000406757 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
GPC3-203ENST00000406757 IGLV5-52A0A0A0MRZ9 124 aa5.38□□□□□ -1.55
GPC3-203ENST00000406757 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
GPC3-203ENST00000406757 COX8AP10176 69 aa5.38□□□□□ -1.55
GPC3-203ENST00000406757 MEIG1Q5JSS6 88 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms